| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2703 |
|---|
| Symbol | queA |
|---|
| ID | 4279609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3247675 |
|---|
| End bp | 3248715 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135508 |
|---|
| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| Protein accession | YP_751382 |
|---|
| Protein GI | 114563868 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000074202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTG CAGATTTTTC ATTCGACCTA CCTGATGAGC TGATTGCTCG CTATCCGACA
GCACAACGCA ATGCTTCGCG TTTACTCACG TTAAGTGGCG AAAACAGTGA GCTTGCAGAC
AAAAAATTTA CTGATTTATT CAATCTAATC AATCCTGGAG ACTTGATGGT GTTTAATAAC
ACCCGAGTTA TACCAGCACG TTTATTTGGT CAAAAGTCGA CTGGCGGCAA GCTCGAAATT
CTCGTTGAAC GCATGCTCGA CGATAAACGC ATTTTAGCCC ACGTTCGCAG TTCAAAATCT
CCTAAAGTGG ATACGCTTAT CGACTTAGAT GGCGGCTACC AAATGAAAAT GTTGGCTCGT
CACGATGCAT TGTTTGAGCT TGAGTTACAG TCTGATAAAA CCATATTAGA AGTGCTTGAA
GACGTCGGTC ACATGCCATT GCCTCCTTAC ATTGATCGTC CAGATGAAGA TACTGATAAA
GAACGTTATC AAACAGTGTA TAACCAAACG CCAGGCGCTG TAGCTGCGCC GACAGCAGGG
TTACACTTTG ATGATGCCAT GTTAGCCGAT TTAAAAGCCA AAGGGGTTAA TATTGCCTTT
GTTACTTTAC ATGTCGGTGC CGGTACATTC CAGCCTGTAC GAGTGGATAA TGTGCTTGAA
CACAAGATGC ATTCAGAATG GGCCAATGTG TCACAAGAGG TTGTTGATCT AATTGCGCAA
ACTAAAGCGG CTGGAAATCG TGTTGTTGCC GTAGGCACAA CCTCAGTACG TTCATTAGAA
AGTGCAGCGC GTGCAAGTGG AGATAGTCCG CTTGAAGCCT TTAGTGGTGA TACCGATATC
TTTATTTACC CAGGTTTTCA ATTTAAAGTT GTTGATGCCA TGGTCACTAA TTTTCATTTG
CCAGAATCAA CATTAATTAT GCTGTTGAGT GCTTTTGCCG GTTATGAAGC GGTCATGAAG
GCTTATCAAC ATGCAATTAC GCAAAAATAT CGCTTTTTTA GCTATGGCGA TGCGATGTTT
GTGACGAAAA AAGCCCCGTA G
|
|---|
| Protein sequence | MRVADFSFDL PDELIARYPT AQRNASRLLT LSGENSELAD KKFTDLFNLI NPGDLMVFNN
TRVIPARLFG QKSTGGKLEI LVERMLDDKR ILAHVRSSKS PKVDTLIDLD GGYQMKMLAR
HDALFELELQ SDKTILEVLE DVGHMPLPPY IDRPDEDTDK ERYQTVYNQT PGAVAAPTAG
LHFDDAMLAD LKAKGVNIAF VTLHVGAGTF QPVRVDNVLE HKMHSEWANV SQEVVDLIAQ
TKAAGNRVVA VGTTSVRSLE SAARASGDSP LEAFSGDTDI FIYPGFQFKV VDAMVTNFHL
PESTLIMLLS AFAGYEAVMK AYQHAITQKY RFFSYGDAMF VTKKAP
|
|---|
| |