| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2688 |
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| Symbol | |
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| ID | 4279594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3230929 |
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| End bp | 3231990 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135493 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_751367 |
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| Protein GI | 114563853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000261317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCT TATCTAATAA TTTATTCTTC GGCACCATTC TCGCAACAAC AGTACTAGCC
ACAATAGTAT CTTATACAGC GCAAGCCTCT GATGTTGCAA CATTAAAACT AGTATATTCG
GAACAATATC AGCCGCGTAT TTATGATGCA AAAATTGAAG CTATTAAAGC GGCAACAATT
TCTGCACAAA CCTCAGGGCG GATCATTAAT ATTCATTTTG ATGTAAATGA CCTCGTCCCA
CAGGGCGCTG CATTATTGGA GATTACCAAT AAAGAGCAAG GTGCAGGATA CGCGGGGGCA
GAAGCTGATC TAGCTAAAGC TGAGGCGCTA AACAGTGAAG CACAAGCACA ATATCTTCGT
TATAAAACAT TATTTCCCAA GGGCGCCATA TCAAAAGGTG CGATGGATGA AGCCACTGCC
AAAGCAAAAT CCAGCAAACA AGCAGTCAGT GCCGCTCAAG CACAGTTAAT AAAGGCTAAA
GAAAGTTTAA ATTACACTGT AGTAAGCGCA CCTTTTAGTG GCCGAATGAC CCAACGATTT
ATCGAACAAG GTGAAACCAT ATCTTACGGC CAAGCGTTGT TCTCTGGCTA CGACACTCAA
CACCTTAGAG CTGTATTTCA AATTCCTCAG CAAGATGTGG CTCAGGTGCA AAAACAAGAA
CAAGTAAGCG TTCAATTGTT CAATGGCGAT AAAATCATTT CTAATGATAT TAACGTCTAT
CAATTTGCCG ATCCGTTAAC TCATCAACAT CAAGTTAGAG TAAACATTGA TGCTAGTAAC
ATTGAAGACG TCATAGTAGG TCAATGGATA AAAGTCATCG TTAACTTCCC TAGTCGAACG
AGTTTAATGA TCCCATTATC GGCCATACAT CAAGTCAGTG ACTTAACGTC GGTATATCGT
CAAATGGCAG ACAAAATAGT GCTTAACCAA GTACGTATCG GCCGAGTAGA CCATCAGAAT
AATACCGCAG AGGTCTTATC TGGTTTAATG GAAGGCGATG AAATTGTTAT CGACGCTGGA
CGTTATTTAA TACAGTCCTC AGCAACAAAA GGTCAGGAGT AA
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| Protein sequence | MSRLSNNLFF GTILATTVLA TIVSYTAQAS DVATLKLVYS EQYQPRIYDA KIEAIKAATI
SAQTSGRIIN IHFDVNDLVP QGAALLEITN KEQGAGYAGA EADLAKAEAL NSEAQAQYLR
YKTLFPKGAI SKGAMDEATA KAKSSKQAVS AAQAQLIKAK ESLNYTVVSA PFSGRMTQRF
IEQGETISYG QALFSGYDTQ HLRAVFQIPQ QDVAQVQKQE QVSVQLFNGD KIISNDINVY
QFADPLTHQH QVRVNIDASN IEDVIVGQWI KVIVNFPSRT SLMIPLSAIH QVSDLTSVYR
QMADKIVLNQ VRIGRVDHQN NTAEVLSGLM EGDEIVIDAG RYLIQSSATK GQE
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