| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2661 |
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| Symbol | rlmL |
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| ID | 4279568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3194985 |
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| End bp | 3197123 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135461 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_751340 |
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| Protein GI | 114563827 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT TTTTTGCTGC AGCCCCAAAG GGTTTCGAAT ATAGCCTTGC TTCTGAACTT
AAAGAGTTCG GAGCAACCGA TGTTAAAGAA AGTGTTGCTG GAGTATATTT TTCTGCTTCA
TTAGAGCTGG CTTATCGCAT TACATTATGG ACTCGTTTAG CGAGCCGTAT CGTATTAGTC
ATCTATAAAG GAGCTTGTGA TTCTGCTGAG CAACTTTATA ACGCAGCATA CTGCATTGAT
TGGCCATCGC ATTTTTCCCA TAAAAAAACC TTCAGTATTG ATTTTCACGG CACGGGTGGT
TTCATTAATA ACACTCAATT TGGTGCGCTG AAAATTAAAG ATGCTGTTGT TGACCGTTTT
CGTGATGATG GTACTCCTCG TCCCGATGTA GAACGTGTCA ATCCAGATTT TAAAATTGAT
GCCCATTATC GTAATGGTCA ACTGACTATT TCGATGAATT TCTCAGGCGC TTCTTTACAC
CAACGTGGAT ACCGTTCAAC TACGGGCGAA GCACCATTAA AAGAAAATCT CGCTGCCAAT
ATGTTGGTAC GCAGTGGTTG GCAAGCTAAT CCTATTACTG TGCTTGACCC ATTTTGCGGT
AGTGGCACGG TACTAATAGA AGCGGCATTA ATGGCTGCTG ATATTGCGCC TGGACTAAAA
CGTGAGAAAT TTGGTTTCGA AAATTGGCAG AGTCACAATA AAGCAATGTG GCAGGTTATT
TTTGACGAAG CTCAAGCGCG TGCAACATTG GGCAAAACGC GTTGTAAGCT TAAATTTTAC
GGTTCAGACA TCGAACCTCA CCTGATTTCT ATCGCTAAGC GTAATGCTGA GAATGCTGGT
GTTGCTGAAT TAATTGAATT TAGTGTGTCA GATGCGCTCG ATGTAACACC TCCTGTAAGT
GAAGGCTTTT TGATTTCTAA CCCGCCTTAC GGTGAGCGTT TGGGTAATGT GACCGAGCTT
TTACAACTTT ATTACCAACT CGGTGATAAG TTTAAAAAAG AGTTTGGTGG CTGGAAAATA
GCTATGTTGT GCAGTGATGT TGAACTTATA TCATCGCTTA AACTAAAAGC TGATAAGCAG
ATGAAAATGT TCAACGGCGC ATTAGAATGT GCTTTTAACA TTTATACCTT ACACGCCAAC
AGTACCCGCC GCGACGTGCC TGAATTGCCT GAAGGTGTTG ATATTATCGA CATTGCGCCA
GCATTTGCGA ATCGTATTAA AAAGAATGTT AAACAGTTTG AGAAATGGGC TAAAAAAGAG
CGCATAGACA GTTATCGTTT ATATGATGCT GATTTACCTG AATACAACGT CGCCATTGAT
AGATACGTCG ATTATGTTGT TATTCAAGAA TATTCAGCTC CAGCAACTAT TCCTGAAGCG
GTGACCAAAC GCCGTATTAG TGATGTGCTA TTAGCGTTGC CAGGTGCCTT AGGGATTCAT
CCTGATCGTA TCACCTTGAA AACTCGTGAA CGTCAGAAGG GTGCTAACCA GTATCAAAAA
ATTGACGAAC GTAAAGTAGA AGTTATCACT GAAGAATATG GTGCTAAATT TAAACTTAAC
TTAACCGGTT ATCTCGATAC TGGTTTGTTT CTCGATCACC GTGTTACACG TAAATTGGTT
GGCGATAAAG CTAAAGGCAA AAATGTCCTC AATTTATTCG CTTACACGGG GTCTGCATCA
GTCCATGCTG CGATTGGCGG AGCTAAATCA GTTACCACCA TCGACATGTC TAATACCTAC
ATCAATTGGG CCAAAGAAAA CTTTGCCTTA AATGGTTTGT CTGGTGCTAA ATACGATTTT
ATTCAGGCAG ACTGTTTGCA GTGGATAAAA GATAATAGTC ATCAAAAATA TGAACTCATT
TTTATCGACC CTCCGACGTT TTCAAATTCA AAACGTATGG AAGACAGTTG GGATGTGCAA
CGCGACCATG CAGAGATGTT GGGCGGGTTA ATTAAGTTGC TTTCTCCAAA TGGCGAGCTT
ATTTTCTCAA ATAACAAACG TAAATTTAAA ATGGATATCG AAGCGTTGAA CCAAGCTGGT
ATCGACGTGA CTAATATCGA CCATTTATGT TTACCGCTGG ATTATAAACG TAATCCACAT
ATCCATAATG TGTGGCTACT GACACATGCA AAAAAATAG
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| Protein sequence | MFNFFAAAPK GFEYSLASEL KEFGATDVKE SVAGVYFSAS LELAYRITLW TRLASRIVLV
IYKGACDSAE QLYNAAYCID WPSHFSHKKT FSIDFHGTGG FINNTQFGAL KIKDAVVDRF
RDDGTPRPDV ERVNPDFKID AHYRNGQLTI SMNFSGASLH QRGYRSTTGE APLKENLAAN
MLVRSGWQAN PITVLDPFCG SGTVLIEAAL MAADIAPGLK REKFGFENWQ SHNKAMWQVI
FDEAQARATL GKTRCKLKFY GSDIEPHLIS IAKRNAENAG VAELIEFSVS DALDVTPPVS
EGFLISNPPY GERLGNVTEL LQLYYQLGDK FKKEFGGWKI AMLCSDVELI SSLKLKADKQ
MKMFNGALEC AFNIYTLHAN STRRDVPELP EGVDIIDIAP AFANRIKKNV KQFEKWAKKE
RIDSYRLYDA DLPEYNVAID RYVDYVVIQE YSAPATIPEA VTKRRISDVL LALPGALGIH
PDRITLKTRE RQKGANQYQK IDERKVEVIT EEYGAKFKLN LTGYLDTGLF LDHRVTRKLV
GDKAKGKNVL NLFAYTGSAS VHAAIGGAKS VTTIDMSNTY INWAKENFAL NGLSGAKYDF
IQADCLQWIK DNSHQKYELI FIDPPTFSNS KRMEDSWDVQ RDHAEMLGGL IKLLSPNGEL
IFSNNKRKFK MDIEALNQAG IDVTNIDHLC LPLDYKRNPH IHNVWLLTHA KK
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