| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2655 |
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| Symbol | |
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| ID | 4279562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3188023 |
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| End bp | 3189813 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135455 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_751334 |
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| Protein GI | 114563821 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.342543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATAT CATCTCATTA TTTTCCGTTG TCGCAGCTAA ATTACCACTA TATGAATTCA
ACGCTACTGC CTAGTGCCAA ACTCGCTCCT CAATATCATT TACCTGATGC ATCGACTTCA
GTTTCTTTTC CAAGCCATAT ACTACTTGGC CAAGAACGAG TGGTTGAAAC ATTCAAATTA
ATGAGCAAAA CAAATTCGCA ACATTTATTT CTTGCTGATT TTTTAGGGGT AGATAGATCA
CTATTTATTG ATGCGTTGGT AACTCAAGCT AACACGCCTT CAAGTCATTA CCTTGTTGCA
ACTAAAAAAC AGCAAGAAGA TACGGACATT CAGTTTAAGT GGCAACAAAC ACTCCCGCCT
GAACATGTCG GCATTATTGC TAAACAAGAA TCACTGTCCT GTTATTTACA AGGGACAATT
CGCCGTGCTG ATTTACTTGG CAGAATGCTT AAAACGGATA AATCCAGTGT TTATAAACCC
GGTGCACTAG CGAAAAATCA TTTCGTGTTT ATTTGCTTAG CGTCATTATG GCAGCGTGAA
AGCCTGTGGG ATTTGTTGAT GCAAATCATC CACGATGGCT TTTATCGTAT CAATAATGAG
TTAACCCCTA TTCCACTGAA TTGTAAGATT GTTCTTGTGG GCTCTGGTTT ATCGTATAGC
CAGCTTAGAG TTGAAGACCG AAACTTTAAT CGCCATTTTC CATTGCTAGC TGAAATGAGC
AATGAAGTTG ATCTAACGCA GCATCCTGAA TCGTCTTATG TGCAATGGTT GAACGTACTT
GCCCAAGCAG AATCTGTTGA ATTAGAACCA TCAAGCTTAT TACCATTATT TTGGTATAGC
TCTCGTTTGG TTGAGCATCA ACAACGCTTA AGTTTAAGTA TGTTGGAGTT TAGGCAACTA
TTAGGTCAAG CAAAAGTGTA TTCAGGTCAA GCTACATTGA ATGCTGCAGC AATAGCTAAA
GCACTGGAAA AATTAAAATT TCGCCACAAT AGCTCTGAAA TATATTCAGC TCAAAGTTTT
GATGATAATT TCATCAATCT GCCAACTAAA GGCGCTATGG TAGGCCAAAT TAATGCCCTT
ACAGTTATTG ATACAGGCGA TTATACCTAT GGTGAGCCTG CCCGTATTAC CTCATCAGTG
CATTATGGTG ATGGCGAAGT GGCAGATATT GAACGTAAAT CAGAGTTGGG GGGCAATATT
CATGCAAAAG GCATGATGAT CCTATCTGCT TGCTTGTACC GAATTTTTGG TCGTGATGCG
CCTCTTCATT TAAATGCAAA TATTGTGTTT GAACAGTCTT ACCAAGAAAT TGATGGTGAT
AGTGCTTCAC TCGCCGAGTA TTGTTGTTTA ATGTCTGCAA TAGCAGAACA CCCCATTATC
CAAAGTTTAG CTGTTACAGG CGCATTAGAT CAGTTTGGCA ATGTACAAGC GATTGGTGGT
GTAAATGAGA AAATTGAAGG TTTCTTTAAT TTATGTCAAC GCCGCGGTTT AACGGGTGAA
CAAGGTGTTA TTATGCCCAA GGCTAATGTA TTACAGCTAA ATCTTGAACC TGCTGTAATT
GAAGCCATTG ATAAAGGGTT ATTTCATATC CATGCAATTG AACATATGGA TCAAGCAGTT
GAACTGCTGA TGCAAATGCC TGCTGGAGTC GCTAATGAAG ATAACGACTT TGCACCAGAC
ACGCTTTACG GATTAGTACA ACAACGTTTA GATAAATTAG CCGGTCAAGA TGATGACGAC
GTGGAACTGA ACTTTTTTGC TAAATTGTTA GCTAGATTAC ACATTATTTA G
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| Protein sequence | MLISSHYFPL SQLNYHYMNS TLLPSAKLAP QYHLPDASTS VSFPSHILLG QERVVETFKL
MSKTNSQHLF LADFLGVDRS LFIDALVTQA NTPSSHYLVA TKKQQEDTDI QFKWQQTLPP
EHVGIIAKQE SLSCYLQGTI RRADLLGRML KTDKSSVYKP GALAKNHFVF ICLASLWQRE
SLWDLLMQII HDGFYRINNE LTPIPLNCKI VLVGSGLSYS QLRVEDRNFN RHFPLLAEMS
NEVDLTQHPE SSYVQWLNVL AQAESVELEP SSLLPLFWYS SRLVEHQQRL SLSMLEFRQL
LGQAKVYSGQ ATLNAAAIAK ALEKLKFRHN SSEIYSAQSF DDNFINLPTK GAMVGQINAL
TVIDTGDYTY GEPARITSSV HYGDGEVADI ERKSELGGNI HAKGMMILSA CLYRIFGRDA
PLHLNANIVF EQSYQEIDGD SASLAEYCCL MSAIAEHPII QSLAVTGALD QFGNVQAIGG
VNEKIEGFFN LCQRRGLTGE QGVIMPKANV LQLNLEPAVI EAIDKGLFHI HAIEHMDQAV
ELLMQMPAGV ANEDNDFAPD TLYGLVQQRL DKLAGQDDDD VELNFFAKLL ARLHII
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