| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2629 |
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| Symbol | |
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| ID | 4279536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3146439 |
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| End bp | 3148817 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135425 |
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| Product | DNA polymerase II |
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| Protein accession | YP_751308 |
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| Protein GI | 114563795 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.085046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATA CCCATGTGAA GGGACGAGTA TTAACTCGCC ATGCTATTTA TCGGCATGGA
CAATTAGTCC TTCAATATTA TATCAAAACC GCTGAAGGAC CTGTATTAGC TGAACTATAT
CACAGTGAAG TGATCTGTTT CTGTCGTCAG CAAGATGTGG ATCAATTAAG TCAAAAAGTC
GGCTTTGCTC TTAAGGCTGA GACAATATCA TTGCTGAGTT TTGCACATGA ACCTATCAGT
GCGCTGTATC TTAAATCAAA TACTCAATTG AAATTACTTG GTCGTATTGC TAGTGATATC
GGTATTACCT TATTTGAAGC CGATATTAGG CCTGAGCAAC GCTACCTAAT TGAACGGTTT
ATCGCCTTAG ATATTGAATG CTCAGGGCAT TATCAAGAGC GTAATCCAAC TTCAACTATT
CCTTTGTTAT CGATTAATCG GGCTAGAAAA ATGCCCAGCA ACGAACTAGT CGATATCCCA
TTAAAAATGG TTTCACTGGA TTTTGAGTGT AGTTTTACTG GGGAACTTTA TTCGGTTGGT
TTATATGGTG CCGATTATCA ATGTGTGTTT ATGGTGGGCG AACCGCAAGC AGAATGTCAT
GATTTTATCG TTTGGGTACA AAATGAGGTT GAACTGATAC ATCATTTAAT AGCGTGGTTT
AGCGACTATG ATCCCGATAT TATTATCGGT TGGGCAGTAG TGACCTTTGA TTTAGCCTTG
TTGTTCAAAC GCTGTGTTTT ACATCAAATT CCATTATTAA TTGGTAGAGG ACATACCGAA
CTGAGCTGGA AAGTTGCCGA TAAATATAGG CCTGAAACAC TCTCTTTACC TGGGCGCGTG
GTGTTGGATG GTATTGATTG GCTTAAAGCG GCATTTTATC AGTTTGATAG TTTTTCGTTA
GAGTCTGTAT CACGGCAATT ATTATCTGAA GGTAAAGCCA TTGATCATGT AGAAAATCGT
GGCCAAGAAA TTACCCATTT ATTTGAACAA GATAAAAATG CATTGGCTTT TTATAATATT
ACAGACTGCC GGCTAGTGTG GGATATTTTT GAAAAAACAC AGTTGTTAGA TTTTGCTATT
GAACGCGCTA AGTTAACGGG TTTGGAGTTT GGCCGAGTGG GTGCATCGAT TGCGGCATTT
TATCATTTGT ATCTGCCTCA CTTACATCGA AGTGGTTTTG TAGCACCTGC ACAACCCGCT
AGCCAAGGCT TAGAAAGCCC TGGTGGATAT GTTATGTCTT CTATACCAGG TTATTATAAA
GATGTTTTAG TATTAGATTT TAAAAGTCTA TATCCGTCGA TTATTAGAAC ATTCCTTATC
GATCCTAAAG GCTTAGTTGA GGGGCTTTAC GCTAGGGAAG TAAAAGGTGA TGCAACGACA
GTGGCTGGAT ATTTAGGTGC TCAATTTAGT CGAAAATCAC CTATTTTGCC TGCATTAGTT
GCCAGCCTTG CAGAGCAAAG AGAACTGGCC AAACGAGATA GAAATGCGCC GTTATCACAA
GCGATAAAAA TTATTATGAA CTCATTGTAT GGCGTACTAG GCTCAAGAGG TTGTGTATTT
CATGATGCTA AGTTAGCCAG TTCGATTACC ATGCGCGGTC ATCAAATTAT GAAACTCACA
AAGCAATGGA TAGAAGAGTG CGGTTATCAA GTGATTTACG GTGATACCGA CTCTACCTTT
GTCTGGTTAG GGGATAATCA TGGGATTAAA GATATCCAAG CGGTTGGTAA ACACCTATCA
GTATCAATAA CCCAACGTTG GCTTGAATGG TGTGTAGAAG AATATCAATT AGACAGTTAT
CTTGAGTTGG AATTTGAAAC CCACTTTGAA CAATTTATTA TGCCTACCTT AAGGGGCTCA
GATGAAGGCA GTAAAAAGCG TTATGTCGGC GCGGTGTCAA ATGATCAGCA ACAATTAACT
CTGACTTTTA AAGGTATGGA GCAGGTGAGA AGTGATTGGA GCCCTATTGC AAGAAGGATG
CAGTACCATT TATATGAATT ATTTTTCAAG GGCGAGGATG TCATTGATTT TTTGAGTAAT
GAGCTTGCGG CAATTAAGTG TGGTGCTCGA GACAATGAAC TTATCTTTAA AAAGCGATTA
AGACGCAATG TTGAAGATTA TACCGCAAAG TCGTCACCCC ATGTTAAAGC CGCGAAACAG
CTTGCCGAAC TACTCGGAGA CGTAAGCGTT ACCCGTAAGG GACAACAGAT ACGATATATA
ATGACGCTCA CTGGTGCACA AACCATAGAA GCAAAACCAC AAAATATTGA TTATGAATAC
TATATTTGTA AACAAATCAA ACCCATAGCT GAGCCCATTC TACAACTGTG TGGTCATAGC
TTTGACTCAC TAGTAAATAA TCAACTCCTA TTGCTTTAA
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| Protein sequence | MTNTHVKGRV LTRHAIYRHG QLVLQYYIKT AEGPVLAELY HSEVICFCRQ QDVDQLSQKV
GFALKAETIS LLSFAHEPIS ALYLKSNTQL KLLGRIASDI GITLFEADIR PEQRYLIERF
IALDIECSGH YQERNPTSTI PLLSINRARK MPSNELVDIP LKMVSLDFEC SFTGELYSVG
LYGADYQCVF MVGEPQAECH DFIVWVQNEV ELIHHLIAWF SDYDPDIIIG WAVVTFDLAL
LFKRCVLHQI PLLIGRGHTE LSWKVADKYR PETLSLPGRV VLDGIDWLKA AFYQFDSFSL
ESVSRQLLSE GKAIDHVENR GQEITHLFEQ DKNALAFYNI TDCRLVWDIF EKTQLLDFAI
ERAKLTGLEF GRVGASIAAF YHLYLPHLHR SGFVAPAQPA SQGLESPGGY VMSSIPGYYK
DVLVLDFKSL YPSIIRTFLI DPKGLVEGLY AREVKGDATT VAGYLGAQFS RKSPILPALV
ASLAEQRELA KRDRNAPLSQ AIKIIMNSLY GVLGSRGCVF HDAKLASSIT MRGHQIMKLT
KQWIEECGYQ VIYGDTDSTF VWLGDNHGIK DIQAVGKHLS VSITQRWLEW CVEEYQLDSY
LELEFETHFE QFIMPTLRGS DEGSKKRYVG AVSNDQQQLT LTFKGMEQVR SDWSPIARRM
QYHLYELFFK GEDVIDFLSN ELAAIKCGAR DNELIFKKRL RRNVEDYTAK SSPHVKAAKQ
LAELLGDVSV TRKGQQIRYI MTLTGAQTIE AKPQNIDYEY YICKQIKPIA EPILQLCGHS
FDSLVNNQLL LL
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