| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2623 |
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| Symbol | |
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| ID | 4279530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3138729 |
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| End bp | 3139133 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135419 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_751302 |
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| Protein GI | 114563789 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00147196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA AGAAGCATTC CACTATGGAA GAGGAAGCGC AAATTGATAT GACCCCGATG
CTAGACATCG TGTTTATCAT GCTGATCTTC TTTATTGTAA CAACATCGTT TGTTAAGCCA
TCAGGCTTAG ACTACAACAA GCCTAAAGCG TCACAGGCTA CGTCTAAACC TTCGGCGAAC
ATCTTTATTG GTATCAGCAA AACTGGTGTC ATTATGATGG AAAATCGTCA GGTTGATATC
GAACGTGTAA CTGCAAACGT AGAACGTATG TTGGCGGAAG CACCTGAAGC AGCTGTACTG
ATCCAAGCAG ACAAAGACGC TTTACATGGT TTAGTCGTAA AAGTGCTTGA TAACGTTAAA
GCTGCAGGTA TCGATAAAAT TTCAGTATCA GCGGGGAATG AGTAA
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| Protein sequence | MARKKHSTME EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSAN
IFIGISKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADKDALHG LVVKVLDNVK
AAGIDKISVS AGNE
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