| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2605 |
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| Symbol | |
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| ID | 4279512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3115621 |
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| End bp | 3118884 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135401 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_751284 |
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| Protein GI | 114563771 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0189627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA TATCTAAAGA GTCGATATTT CAAAGCGACA TCCTAAGTCA AATGCAATCT
CAAGGATGGT TATTGGGTGA GTCGAGTAAA TACAACAAAC AGTTGGCCTT GTATCCTGAA
GATGTAATTG ATTTTGTTAA GGCTACACAG CCTGAACAAT GGGATAAGCT GGCACAACAC
TTTCCAGATA CTGAGCGTAA TCCTACCGCT ACAGCTGATG CATTACTTAA ATCATTAGAA
CGTGATTTAC AAAATAAAGG CACATTATGG GTATTGCGAA ATCAGGTAAA AGACCGTGGG
GCTAAATTTA CCCTATGTAG TTTTAAGCCT GATCATGACC TAAACCCTGA TGCAAGTGCT
CGTTATGACA AAAACATTCT CAAGGTTGTT CCTGAGCTGG TTTATTCACC AAATGGCTAC
GACGGTCGAT TAGATTTAAC CTTATTCGTC AACGGTATTC CTGTGGCGAC CTGTGAGCTT
AAATCAGAGT TTAAGCAGTC AATCACTAAT GCCAAAGTTC AGTATATGAA GGACAGGCAA
CCTAAAGACC CTATAACTAA AAAACCAGAA CCATTATTAA CCTTCAAACG TGGTGCATTA
GTTCACTTTG CGGTAAGCCA ATACAATGTA GCAATGACCA CTCGTTTGGC AGGTAAAAAA
ACCTTCTTTT TACCGTTTGA TCAAGGCACA GCTGAAGGTG GTCAGGGCAA TGATATTCCT
GAAGATCCTA ATGAATATGC AACTTCTTAC CTTTGGAACG AGATTTTCCA AAAAGACAAT
CTGCTACTTA TATTGAGCCG TTATATTCAC CTTGAAGTAA AAGATGAAGA GCATCTAGAC
GGTTCAATCA AGGTCAAAGA AACCCTTATT TTCCCTCGTT ATCATCAATG GGCAGTGGTT
TCTAAGCTGT TAAATACCGT CGATATTGAA GGGACGGGGC AGAAATACCT TATTCAACAC
AGTGCGGGTT CAGGTAAGTC TAATTCAATT GCTTGGCTAG CACATCAACT AGCTTCAAAG
CATTACACTT CACCATCGAT TGAAATCGAT CATCCTGAGC TTGGTAAAAA AGTCGGTGAT
AAGGTGTTTG ACTCAGTGAT TGTCATTACT GACCGAACAG TGCTTGATAG TCAGCTACAA
GATACTATCT ATCAGTTTGA TCACAATGAA GGCATGATTG CTCGTGTTAA TCGTGAAGAG
GCTCAAGGCT CTAAGTCCAG CCAATTAGCG GGAGAGTTAA AGGCCAGTAC ATCAATCATT
ATCGTCACCA TACAGACCTT TCCGCACGTA TTAGAAGCAA TCCGTAAAGA CTCAACTCTT
GCTGGTCGAA GCTTTGCTGT AATTGCCGAT GAAGCGCATT CTAGCCAAAC TGGTACAACC
GCACGAAAAT TGCGTGAAGT CCTTATGACG GAGCAATTAG AAGGGGATGA AGAGTTAGAC
AGTGAAGATA TGCTGCGGCT TTCTCTTGAA GCCCGTAAAG GCTCAAAAAA TATCAGTTAC
TTTGCTTTTA CTGCGACCCC TAAAGCTAAA ACTCTTGAGT TATTTGGTAG AAAACCTGAC
TTAGATGCAC CTGCTAGTGA TGGCAATAAA CCATTACCAT TTCACGTCTA TTCTATGCGC
CAAGCGATTG AAGAAGGCTT TATCCTCGAT GTATTACAAA ATTACACCAG TTACCGAGTT
GCCTATCAAT TGGCACACGG TCAGCCCGAA AGTGATCATG AAGTTGACAG TAAAAAAGCA
TCTTCAAAAA TGGCAAAATG GGTCAGGCTA CATCCATATA ATATTGCTCA AAAAGTTGAA
ACTATTGTTG AACACTTCAA TAGCAAAATT AAGCATCTGC TCGGCGGCGA AGCAAAAGCA
ATGGTAGTCA CTAGTAGTCG TTTAGAGGCG GTACGGTATA AATTGGCGTT TGAGAAGTAC
GTACATACTA AAGGCTACGA AAATATCAAT GCGATGGTGG CGTTCTCTGG CGAGGTAAAT
GATCCTGACT ACTCTCTGTT ACAAGGGAAT GATCAACCAT TTACTGAAAA CAATATGAAC
CCGAACCTGC GTGGGCGGGA TATGCGTAAA GCGTTTGACA CTAATGACTA TCAAGTGATG
CTAGTGGCAA ATAAATTTCA GACGGGTTTT GATCAACCAA AGTTAGTCGC TATGTATGTC
GATAAGCCAT TAAAAGGCGT GGAGTGTATC CAAACACTTT CTAGGTTAAA TCGTACCTAT
AAAGGCAAAG ATATGACCTT CGTATTGGAT TTTGTGAACG ATCCTGAAGA CGTACTGAAA
GAGTTTAAAG TGTACTTTCA AACGGCTGAG TTGTCTGGGG TATCTGATCC TAATATCGTC
TACGAGATTA TGGAAAAGCT AGCTGATGTT GGGATCTACC AATGGTTTGA GGTAGAAGCT
TTTGTGACCG CCTATAACAG CAAACAAGCT AATCAAGCAA AACTGGCTAA TCTGTGCAAA
GCACCGGTAG AGCGTTTTAG TGTGCGCTAC AAAGAAGCTA GCCATGTATT GCAAATAGCA
CAAGCGGACT TATCTAAAGC TAAATTAGAT CGTAATGATA AAGCAATTAA GTTTGCTGAG
AACAGTGTTA AACACGCCAA AGAAGCTAGA GATGTTTTGG AGGTGTTTAA GAAGGATTTG
ATATCGTTCT ATCGATACTA TGAGTTTAGT TCTCAGATTG TTGATTTTAA TGATTATGAG
CTAGAAAAAC TAAGCATCTT TGCGAAACAC TTACATCCCC TTTTACGCTT TGATGTAATT
GATGATGATA TTGACCTCAG TGATGTTGTG ATGACTCATT ATCGGTTACA TGAGCAACGA
GAAGCTGATT TGCATTTGGG TCATAAGATT GGTGAAGAGC CGCAGTCTTA TTTAGCACCG
AGTAAAGAAG GGTCTGGAGC TACACCTAAA GACCCAAAAA CTGAATTGTT AAACGAAATC
ATCGAGAGAA TGAATGACTT GTTCATTGAA GATGGTTTAT CAGAAAACGA TATGCTCAAT
TACGCTAATA CCATAGCAGG AAAGATTTCT GAAAATGAAA CGGTAATGGA TCAGCTTCGC
AGCAATACCA AAGAACAAGC AATGCTGGGA GAGTTCCCTA ATTCAATCAA CAATGCAGTT
ATTGAAAGTA TGGACGTTCA TAACGATATG GCAATGAAAC TACTTTCTAA TGAAGCTGTT
GCGAAAGGCT TTGCAGGGCT GATGTTTGAT GTGTTGATGA AAGGGCTGGC TAAGTCTGTT
AATGAAGCAG ATTTGGGTGT ATAG
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| Protein sequence | MMNISKESIF QSDILSQMQS QGWLLGESSK YNKQLALYPE DVIDFVKATQ PEQWDKLAQH
FPDTERNPTA TADALLKSLE RDLQNKGTLW VLRNQVKDRG AKFTLCSFKP DHDLNPDASA
RYDKNILKVV PELVYSPNGY DGRLDLTLFV NGIPVATCEL KSEFKQSITN AKVQYMKDRQ
PKDPITKKPE PLLTFKRGAL VHFAVSQYNV AMTTRLAGKK TFFLPFDQGT AEGGQGNDIP
EDPNEYATSY LWNEIFQKDN LLLILSRYIH LEVKDEEHLD GSIKVKETLI FPRYHQWAVV
SKLLNTVDIE GTGQKYLIQH SAGSGKSNSI AWLAHQLASK HYTSPSIEID HPELGKKVGD
KVFDSVIVIT DRTVLDSQLQ DTIYQFDHNE GMIARVNREE AQGSKSSQLA GELKASTSII
IVTIQTFPHV LEAIRKDSTL AGRSFAVIAD EAHSSQTGTT ARKLREVLMT EQLEGDEELD
SEDMLRLSLE ARKGSKNISY FAFTATPKAK TLELFGRKPD LDAPASDGNK PLPFHVYSMR
QAIEEGFILD VLQNYTSYRV AYQLAHGQPE SDHEVDSKKA SSKMAKWVRL HPYNIAQKVE
TIVEHFNSKI KHLLGGEAKA MVVTSSRLEA VRYKLAFEKY VHTKGYENIN AMVAFSGEVN
DPDYSLLQGN DQPFTENNMN PNLRGRDMRK AFDTNDYQVM LVANKFQTGF DQPKLVAMYV
DKPLKGVECI QTLSRLNRTY KGKDMTFVLD FVNDPEDVLK EFKVYFQTAE LSGVSDPNIV
YEIMEKLADV GIYQWFEVEA FVTAYNSKQA NQAKLANLCK APVERFSVRY KEASHVLQIA
QADLSKAKLD RNDKAIKFAE NSVKHAKEAR DVLEVFKKDL ISFYRYYEFS SQIVDFNDYE
LEKLSIFAKH LHPLLRFDVI DDDIDLSDVV MTHYRLHEQR EADLHLGHKI GEEPQSYLAP
SKEGSGATPK DPKTELLNEI IERMNDLFIE DGLSENDMLN YANTIAGKIS ENETVMDQLR
SNTKEQAMLG EFPNSINNAV IESMDVHNDM AMKLLSNEAV AKGFAGLMFD VLMKGLAKSV
NEADLGV
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