| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2595 |
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| Symbol | clpX |
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| ID | 4279502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3103802 |
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| End bp | 3105082 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135388 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_751274 |
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| Protein GI | 114563761 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000144337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGATA ACAAAAATAA CGGTGACAGC GGCAAACTGC TGTACTGCTC TTTTTGCGGA
AAAAGTCAGC ATGAAGTCAG AAAACTCATT GCTGGTCCAT CAGTTTATGT ATGTGACGAA
TGTGTTGATT TATGTAATGA CATTATCCGT GAAGAAATCA AAGAGATTTC ACCTAAACGT
GATGAAGACA AATTGCCGAC ACCGCATGAG TTACGCAAGC ATCTTGATGA CTACGTAATC
GGTCAGGATC AGGCTAAGAA AGTGTTAGCC GTAGCGGTAT ACAATCATTA TAAGCGTTTA
CGTAATGGCG CTATCAAAGA TGGTGTAGAG CTAGGTAAAA GTAACATTTT ACTATTAGGC
CCAACCGGTA GTGGTAAAAC TCTATTGGCT GAAACGTTGG CTCGCTCACT TAATGTTCCT
TTTGCTATGG CAGATGCAAC CACACTAACC GAAGCAGGTT ATGTGGGTGA AGATGTTGAA
AACATCATTC AGAAGCTACT GCAAAAATGT GATTACGACG TTGAGAAAGC GGAACGCGGT
ATCGTCTATA TTGATGAAAT TGACAAAATC AGTCGTAAAT CTGACAATCC TTCAATTACT
CGTGATGTAT CGGGTGAAGG TGTTCAGCAG GCGCTGCTTA AGTTAATTGA AGGCACCGTT
GCTTCTGTTC CGCCACAGGG CGGACGTAAG CATCCACAAC AAGAATTCTT GCAAGTGGAT
ACCTCTAAAA TTCTGTTCAT CTGTGGTGGT GCGTTTGCTG GACTTGAAAA AGTCATTGAG
CAACGTGCAC ACACTGGAAC CGGAATTGGC TTTGGTGCAG AAGTAAAAGG CGAAGCGGAT
AAAGCGACTA TTTCACAAAT TCTTAGCCAA GTAGAGCCTG GTGATTTAGT GAAGTTTGGT
TTAATCCCTG AGTTTATTGG TCGTTTACCT GTTGTTGCTA CGCTAACTGA GTTAGATGAA
GCTGCATTAG TACAAATTCT ATCTGAACCT AAAAACGCAT TAACTAAGCA ATATAGTGCA
TTATTTGAGA TGGAAGATGT CGAACTTGAA TTCCGTGATG ATGCATTACA AGCCATCGCT
CAAAAAGCAA TGTCACGTAA AACCGGTGCT CGCGGATTAC GTTCTATTGT TGAAAGCATC
TTGCTTGATA CAATGTATGA TATTCCGTCG ACACAAGGCG TGATTAAAGC TGTTGTTGAT
GAATCAGTAG TGAAAGGCGA GTCAGCCCCT ATTTTGATTT ATGAAAACAC TGAGACACAG
GCTGCTTCAG GCGAGCAATA A
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| Protein sequence | MGDNKNNGDS GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVDLCNDIIR EEIKEISPKR
DEDKLPTPHE LRKHLDDYVI GQDQAKKVLA VAVYNHYKRL RNGAIKDGVE LGKSNILLLG
PTGSGKTLLA ETLARSLNVP FAMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAERG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD
TSKILFICGG AFAGLEKVIE QRAHTGTGIG FGAEVKGEAD KATISQILSQ VEPGDLVKFG
LIPEFIGRLP VVATLTELDE AALVQILSEP KNALTKQYSA LFEMEDVELE FRDDALQAIA
QKAMSRKTGA RGLRSIVESI LLDTMYDIPS TQGVIKAVVD ESVVKGESAP ILIYENTETQ
AASGEQ
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