Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2591 |
Symbol | |
ID | 4279498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3097993 |
End bp | 3098607 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638135384 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_751270 |
Protein GI | 114563757 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATA AGACAACTAG TGAATTGTTT GTGTTATCAC ACTACGGCGA TGACTTATTC GATTCGATCA AAGTCGTGGC ATTACAGTTC AAACATATTA CTTTTGAGCG CTGCCATTTT AACCAATGTG ATTTTAGTCA AAGTGATTTC TATCATTGCC ATTTTATTGA GTGTGTTTTT AGCCAATGTA ATTTAAGTGT AATGTCAGTG GTTGCTACAG AGTTTGATGA CGTTACTTTT AGCGACTGTA AAGCCATAGG TATTGATTGG ACTAAAGCTC AGTGGCCACA GTTTATGACT CAAACCACGA TTAAGTTTGA AAGAAGTTTG CTCGATGGCA GTAATTTTTA TGCTCTGCAT TTACCCGAGC TTTCACTTGT TGGTTGCCGC GCCCATGATG TCGACTTTAG AGAAACTAAT TTAAGCAAAG CAGATTTGCG TTTGACCGAC TTTAATTTAA GCCAATTTAG TCATACAAAT TTAACTAAGG CGAATTTTAC TGATGCGTTG AATTATCAAA TCGATATTAC TGCTAATAAC GTTAAGCAAG CCAAATTCAG TCGGTTCGAA GCCTTAAGTT TACTAGAAGG TTTGGATATT CAATTAGTCG ACTAG
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Protein sequence | MSHKTTSELF VLSHYGDDLF DSIKVVALQF KHITFERCHF NQCDFSQSDF YHCHFIECVF SQCNLSVMSV VATEFDDVTF SDCKAIGIDW TKAQWPQFMT QTTIKFERSL LDGSNFYALH LPELSLVGCR AHDVDFRETN LSKADLRLTD FNLSQFSHTN LTKANFTDAL NYQIDITANN VKQAKFSRFE ALSLLEGLDI QLVD
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