| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2588 |
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| Symbol | |
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| ID | 4279495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3094626 |
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| End bp | 3095507 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135381 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751267 |
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| Protein GI | 114563754 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATAA CCTTAAAGCA ATTATCTATT TTTAAAGCAA TTCATACCTG CGGCCAAATT
TCAAAAGCTG CAATAGAACT ACACATGTCG GTGCCAGCGG TGAGCATGGC CTTGCGTGAT
TTAGAGGACT CTCTGGGCAG CCGTCTTTTT GAACGAAGCA GCACAGGGTT AACCATTAAT
GATAATGGCG AAGTCATGTT GCCTTATGCC AATGAAATGT TATCTAAAGG CATGGAATTA
GAACATGCTT TTGCTCAGGG TAGCCCTATT AGAGGCAGCA TAAAAGTGGG TTGCAGTAAA
ACTGCTGGCA ACTATGTTTT ATCACGTAAA ATTCCAATGT TTAAACAACA ACACCCTTCT
GTTGATATTA AACTGTTCAT TAATAACAGC CTCAGCATTG AGAAAATGGT CGCTGAAAAA
GAGCTCGACC TTGGATTTGT TGATGCTAAA CCTGGACATA AAAATCTACT GCAAGAGCCT
TGGTTACAAG ACCGATTATG TATTATCACA GGCAAAAATA ACCCACTCGT TACCGAAATA
ATTACACCAG AGTTATTATC TGAACAACTT TGGGTTATGG ATGAAACGAT TTCGGTATCG
CGGATCCGTA ATACTCAGTT ACTTAAAAGC GCCAATATCA GTATTAAGCA AGAGTTATCC
ATGAACACTA TGGGGGCAAT AAAAAGAGCA ATAGGTACAG GTGTCGGTAT CAGCGTATTG
CCCTTGTTAG CGGTAGAAGA AGAAGTCGCT AGAGGAGAGT TAATCGAGCT ATCGTTAACA
GACTGGGACT ACTCGCGTCG TTACTGGGCA ATATACCGAA GTGGTCATCC CCTAAGCTCG
CTCGCGCGTG AGTTTTTAGA ATTTAGCCGG CCGACAACAT AG
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| Protein sequence | MRITLKQLSI FKAIHTCGQI SKAAIELHMS VPAVSMALRD LEDSLGSRLF ERSSTGLTIN
DNGEVMLPYA NEMLSKGMEL EHAFAQGSPI RGSIKVGCSK TAGNYVLSRK IPMFKQQHPS
VDIKLFINNS LSIEKMVAEK ELDLGFVDAK PGHKNLLQEP WLQDRLCIIT GKNNPLVTEI
ITPELLSEQL WVMDETISVS RIRNTQLLKS ANISIKQELS MNTMGAIKRA IGTGVGISVL
PLLAVEEEVA RGELIELSLT DWDYSRRYWA IYRSGHPLSS LAREFLEFSR PTT
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