Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2586 |
Symbol | |
ID | 4279493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3091321 |
End bp | 3093087 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135379 |
Product | flavocytochrome c |
Protein accession | YP_751265 |
Protein GI | 114563752 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.110511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAA AATATCTGGT ATCAGCGATG GCATTGGTTG TGCTTTCCTC TGGTACTGCA ATGGCTAAAA CCCCCGATAT GGGGTCATTC CATGCTGACA TGGGCAGTTG TCAATCTTGT CACGCCAAAC CTATCAAGGT TACTGATAGC GAAACTCATG AAAATGCTCA GTGTAAATCA TGCCACGGAG AGTACGCTGA ACTGGCTAAT GACAAATTAC AGTTTGACCC ACACAATTCA CATTTAGGTG ACATTAACTG TACTAGTTGC CATAAAGGCC ATGAAGAACC AAAATTTTAC TGTAATGAGT GTCATTCATT TGATATCAAG CCGATGCCAT TTTCTGATGC CAAGAAGAAA AAATCTTGGG ACGACGGATG GGATCAAGAC AAAATTCAAA AAGCGATTGC TGCAGGCCCA AGTGAAACAA CGCAAGTATT AGTAGTCGGT GCGGGTAGTG CAGGTTTTAA CGCATCATTA GCCGCTAAAA AAGCCGGTGC TAATGTTATT TTGGTGGATA AAGCACCGTT CAGTGGTGGT AATTCTATGA TTTCAGCTGG TGGTATGAAT GCTGTTGGAA CTAAGCAGCA AACAGCTCAT GGTGTTGAAG ATAAAGTTGA ATGGTTTATC GAAGATGCCA TGAAAGGCGG CCGTCAACAG AATGATATAA AACTGGTGAC TATTCTTGCT GAACAGTCTG CTGATGGTGT GCAATGGTTA GAGTCTTTAG GTGCAAACTT AGATGACTTA AAACGCTCAG GTGGTGCTCG TGTCGACCGT ACTCATCGTC CACATGGAGG TAAAAGCTCT GGGCCAGAAA TTATTGATAC TTTACGCAAA GCGGCCAAAG AACAGGGTAT TGATACACGA CTAAACTCTC GTGTAGTTAA GTTAGTGGTT AATGACGATC ATAGTGTTGT CGGCGCCGTG GTTCATGGTA AACATACTGG CTATTACATG ATTGGTGCTA AATCTGTTGT GCTAGCAACG GGTGGTTATG GCATGAATAA AGAAATGATT GCTTATTACC GTCCAACAAT GAAAGACATG ACCAGTTCGA ACAACATTAC CGCCACTGGT GATGGTGTAT TGATGGCAAA AGAAATTGGT GCCAGCATGA CCGATATCGA CTGGGTTCAA GCTCACCCAA CAGTGGGTAA AGACAGCCGT ATTCTGATTT CAGAAACCGT CCGTGGTGTG GGCGCTGTGA TGGTAAACAA AGACGGTAAT CGCTTTATTA GCGAGTTAAC AACTCGTGAC AAAGCATCTG ATGCTATCTT AAAACAACCT GGCCAGTTTG CTTGGATTAT TTTTGATAAC CAGTTATACA AAAAAGCCAA AATGGTACGC GGTTATGACC ATTTAGAAAT GCTTTACAAA GGCGATACTG TTGAACAGTT AGCGAAGAGC ACCGGTATGA AAGTCGCTGA TTTAGCTAAA ACAGTCTCTG ACTACAATGG TTATGTAGCA TCTGGTAAAG ACACTGCGTT TGGTCGTGCT GATATGCCAT TGAACATGAC CCAAAGTCCT TACTATGCCG TTAAAGTTGC TCCTGGTATT CATCACACTA TGGGTGGTGT CGCGATTAAC ACAACAGCGT CTGTACTTGA CCTTCAAAGT AAGCCAATTG ACGGTTTGTT TGCCGCAGGT GAAGTGACTG GTGGTGTTCA TGGTTACAAC CGTTTGGGCG GTAATGCAAT AGCAGATACC GTGGTCTTCG GTCGAATTGC AGGAGATAAC GCAGCCAAGC ATGCTCTAGA TAAATAG
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Protein sequence | MKLKYLVSAM ALVVLSSGTA MAKTPDMGSF HADMGSCQSC HAKPIKVTDS ETHENAQCKS CHGEYAELAN DKLQFDPHNS HLGDINCTSC HKGHEEPKFY CNECHSFDIK PMPFSDAKKK KSWDDGWDQD KIQKAIAAGP SETTQVLVVG AGSAGFNASL AAKKAGANVI LVDKAPFSGG NSMISAGGMN AVGTKQQTAH GVEDKVEWFI EDAMKGGRQQ NDIKLVTILA EQSADGVQWL ESLGANLDDL KRSGGARVDR THRPHGGKSS GPEIIDTLRK AAKEQGIDTR LNSRVVKLVV NDDHSVVGAV VHGKHTGYYM IGAKSVVLAT GGYGMNKEMI AYYRPTMKDM TSSNNITATG DGVLMAKEIG ASMTDIDWVQ AHPTVGKDSR ILISETVRGV GAVMVNKDGN RFISELTTRD KASDAILKQP GQFAWIIFDN QLYKKAKMVR GYDHLEMLYK GDTVEQLAKS TGMKVADLAK TVSDYNGYVA SGKDTAFGRA DMPLNMTQSP YYAVKVAPGI HHTMGGVAIN TTASVLDLQS KPIDGLFAAG EVTGGVHGYN RLGGNAIADT VVFGRIAGDN AAKHALDK
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