| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2556 |
|---|
| Symbol | |
|---|
| ID | 4279464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3060857 |
|---|
| End bp | 3061765 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638135350 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751236 |
|---|
| Protein GI | 114563723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTT TTTTACAAAT AGTTCCAAAT TTGACGTTCG GTGATGATGT TTGCCGTTTA
TTTCATGGCC GTGGCGGATT ATTCGCGGGC GATGAACACC TGTGTTTAGA TTGGTATAAG
CCAGTATTAT TGCTCACCAG TTTTAAGATG CTCGAAACCG AACAACTGGA TGAATTAGTG
ATTGCAATAA AGGCCCTTTG GCAGCAACAA CGACCAACTG AAACACTTAA TTTGGTGTAC
CAATACCGTC ACGGTGGCCA AACATTCAGT GAGTTATTGC ATGGCGAAGT ACCAGAACAG
CATATAGTAA CTGAAAATGA CGCGCGTTTT TTAGTTCATT TATTACGCGG ACAAAACCAC
GGTTTATTCT TAGATATGGC CAATGGCCGA GCATGGGTGA AACAACATGC AAAACATAAG
AAAGTGCTAA ATCTATTTGC TTATACTTGC GGATTTTCGG TAGTGGCTTT GCAAGGCGGC
GCAGATGAAG TGGTCAACAT GGACATGAGT AAAGGCGCGT TAAGCATTGG TAAGCAAAAC
CATGTATTAA ATGACTTACC CGCAGGTGCG CGTTATTTAG GCCACGATAT TTTTAAATCT
TGGGGCAAGT TAACTAAGCT TGGACCGTAT GATTTGATTG TGGCCGATCC ACCCAGTAAT
CAACGTGGCA GTTTTGTGGC CACTAAAGAT TATGAGCGCT TATTGAAACG TCTGCCGGAT
TTGCTTGCCC CGCAAGGTGA AGTGTTGCTG TGCTTAAATG CCCCTGAACT TGGTTGTGAT
TTTTTAATGC AACAAGTGGC TAATACCGCG CCACAATTAT CTTATGTTGA GCGAATTGCT
AATCCGTCCG TATTTGCTGA TATTGATGAA CAGAAATCAT TAAAAGTATT ACGTTACCGC
ATGAGCTAA
|
|---|
| Protein sequence | MKGFLQIVPN LTFGDDVCRL FHGRGGLFAG DEHLCLDWYK PVLLLTSFKM LETEQLDELV
IAIKALWQQQ RPTETLNLVY QYRHGGQTFS ELLHGEVPEQ HIVTENDARF LVHLLRGQNH
GLFLDMANGR AWVKQHAKHK KVLNLFAYTC GFSVVALQGG ADEVVNMDMS KGALSIGKQN
HVLNDLPAGA RYLGHDIFKS WGKLTKLGPY DLIVADPPSN QRGSFVATKD YERLLKRLPD
LLAPQGEVLL CLNAPELGCD FLMQQVANTA PQLSYVERIA NPSVFADIDE QKSLKVLRYR
MS
|
|---|
| |