| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2548 |
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| Symbol | |
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| ID | 4279456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3051258 |
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| End bp | 3052430 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135342 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_751228 |
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| Protein GI | 114563715 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.023404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC TTAGTAATAA ATTTTGGTTT AAGCTTCATG GCTGGTTTTC ATTGCCCGTA
TGGATAATTT TTTGTTTCGT GTGCCTCACA GGAACAATTT CAGTGGTAAG TCATGAATTA
ACCTGGCTTA CAAATCCTGA CTCGAGGGCA AGTAACCCGC AAAATCTGGC AGAAAAACCG
ATGTCAGAAC TCGTTGAAAT TGTGCAACAA GCGCACCCCA CAGCAAACAT CACCACAGTG
ATGAGCTTTG AGTCTTATCT GGTTAATGCG GTTATTTTTA ACGATAGCGA TGCGCCTTTT
GCCATTGCTT ATGTCAATCA ATACACCGGC CAAATACAAG CAATTAATCT TGGCATGACC
TTCACTAATT TTATGCGCTC ATTACACGGT TGGTTACTGT TTCCATGGCA TGTTAATTAC
AGTGTCGGCT ATTACATTGT CTGTTTTATG GCAATTGTGA TGTTGGGTGC ATTGGTTTCT
GGACTGGTGA TTTATAAAAA GTTCTGGCGT TCATTTATCC AGCCAAAATT ACGTTTAAAT
CAAGGTAAAA AAACATTGCT TGCAGATCTA CATCGATTGG CAGGAGTGTG GTCAATGTGG
TTTTTAATGC TTATGAGCAT TACGGGTTTA TGGTATTTAA CACAAGCTAT TATGTGGCAC
AACCACATAG ATTTGGAGCC ACACGCGCCA TTAATTGAAG CAAGCCAAGT GCCTACATCA
GCAAACGATG CTCCCATTAG ACCGTATACG TTATCTAATG CGCTGCAAGT AGCCGAGCAA
AAATTCCCGG GCTTTAAAAG TACCTACATT ATGCTTCCAG AGCACAATCG AGATACTTAT
AAAGTGTATG GCCAGGGAGA TCATATTTTC TATGATCAGT ATGCTTATGG TGTGACAGTG
AATCCATGGA GCGGCACTAT TGAAAGTGAA AGATCGCCAG CGGCAATGAC AACCTTACAA
ACCCTATCGC ATATTGCTGA TCCACTGCAT TACGGCACAA TAGGTGGTTT GTGGACCAAA
GTGATTTGGT TTATCTTCGG TATTTTTCTA ACGGGAATGT CTATCACAGG ATTTTTAATG
TGGGGAAGTC GAACCGTAAA AGCCGGCAGA ACCGACCTAG ATGCTCCGTT GGCAACACAC
AGCCCACAAC TTGTCGAGCA GGAAGGTAAC TAA
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| Protein sequence | MAKLSNKFWF KLHGWFSLPV WIIFCFVCLT GTISVVSHEL TWLTNPDSRA SNPQNLAEKP
MSELVEIVQQ AHPTANITTV MSFESYLVNA VIFNDSDAPF AIAYVNQYTG QIQAINLGMT
FTNFMRSLHG WLLFPWHVNY SVGYYIVCFM AIVMLGALVS GLVIYKKFWR SFIQPKLRLN
QGKKTLLADL HRLAGVWSMW FLMLMSITGL WYLTQAIMWH NHIDLEPHAP LIEASQVPTS
ANDAPIRPYT LSNALQVAEQ KFPGFKSTYI MLPEHNRDTY KVYGQGDHIF YDQYAYGVTV
NPWSGTIESE RSPAAMTTLQ TLSHIADPLH YGTIGGLWTK VIWFIFGIFL TGMSITGFLM
WGSRTVKAGR TDLDAPLATH SPQLVEQEGN
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