Gene Sfri_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2493 
Symbol 
ID4279404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2979025 
End bp2980815 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content43% 
IMG OID638135289 
Productsulfatase 
Protein accessionYP_751176 
Protein GI114563663 
COG category[R] General function prediction only 
COG ID[COG3083] Predicted hydrolase of alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGC GCAAAAAGCA GCAAATGACG CGTGATAAAG TGTCACGCTT AGTTAATTGG 
GGTCACTGGT TTGCCTTCTT TAATGGCATA TTAGCGATGT TAATTGGCGC TCGATATATT
GGCAGTGTCG GCTACCCAGA AACCATTATT GGTTGGGCTT ACCTGTCAAT CAGCACCATT
GGTCATTTTA CCTTTTTGGC CTTTATCGGT TACTTAATTT TTATATTCCC GATTACCTTA
TTATTACCTT ACTCCAAAAT TTTACGTGGT TTTGCTGCAT TTATCGCCTC TCTTGGTTTA
TATGCCCTAC TGTATGACAC CATTATTTAT GACGACTACG GTATCCATTT AAGTCCTTTT
GCGTTCGACT TAGCCTGGCA AGATCTCAAC GCGCTATTAC ACAGCACTTC ATACATAGTG
ACACCTATCG TCATTGTGAT TGTAGAGCTT ACCGCGGCCA ATTATTTGTG GAAACGCATC
GACAAAATTC AGAAAAAACA ATGGGGCAAC AAAGTAGTGC TGTTTGTCGG TATCTGTTTT
GTCAGTAGCC ATTTATTTCA TATTTGGGCC GACGCGACCA ATATGACTGA AGTCACCCGT
TTTGACGACG CCTATCCAGT GTCATACCCT GCGACAGCAC GCTCGTTTAT GGAAAATCAC
GGCATTGACA GCAGCATGCA GTCAACAGAG TCTCGCAACA CTAAATCACG TAAGTTGAGC
TATCCCATCA GTCCGATGCA ATGTACTGCA GACAGCCAAC CCAATGTTAT GGTTATCAGC
ATAGACAGCC TACGCGCAGA CATGGTCGAC AGTGTCACCA TGCCGTTTTT AAGCCAGTAT
CGTATTCAAA ATCAACGTTT TATGAATCAC TATAGTGGTG GTACGGACTT TGAAACCAGC
ATGTTTACCC TCATGTATGG CTTACAAGGC AATTATAGCG ATCGCAAAGA GTTTGATAGC
ACCAGCCCAA TATTGACCAA CACTCTGTCA CAACAAGGCT ATCAATTAGC CATGTTTGCG
CCTGAAAATG ATCAATACGC TGCTAATAGC GCAATGTTCA GCGGTATAAG CATTCATATC
AGCGAAGGCG ATAATGGCAG CGCAGATGCC GATATCAACA CCATTAATGC GGTGAATGCT
TGGCAGCCAA AACAAACACA ACCGTGGTTT GCCTTAGTGA ATCTTACCGC ACCAAAAGAT
TACGATACCC CAGTCGGATT TTTAGGCGTA CAAACCATCA AACCGCATAT GGCATTAAAG
CCTGCGCAAA AGGTGCTGTT TAATCAATAT CGTCAATCAC TTAACTTTAT AGACCAACAA
CTGGCAAGCT TACTCAATAA CGTTAGTGAT GATACCATTG TGCTCATCAC TGGCACTTAC
GGCCAGGTCT TTACCAGTAA TACCAGCGAC GCCCGCAGCG ATTTATCGCC AGGTAATGTT
AAAGTGCCGC TGATCATCCA TTGGCCCGAC AGCCATGGTA ATAAAGTGAA TTACCGCACC
AGCCATTACG GCATAGCGCC AACCTTGCTA AGCCATGTGT TAGGCTGCAC TAATCCAAGC
ACCGATTACA GTTCGGGTCG CAGCTTGTTA GAACCTAATA ATGAAACCTG GGTTTACATA
GGCGACAGCC GCCGCTTTGC CATTTATCAA AAAGCTGAAA TAACAGTATT GGATAGTTTC
GGTAAATACC GCATTTACGA TTTAGACTAT AAAAAACGTT TAGATAAGAA AATGAGCGCA
CCAGAATTGA TCCAGGTAAT GCGTGAAGGT CGTAGACTTT ATAATCAATA A
 
Protein sequence
MIERKKQQMT RDKVSRLVNW GHWFAFFNGI LAMLIGARYI GSVGYPETII GWAYLSISTI 
GHFTFLAFIG YLIFIFPITL LLPYSKILRG FAAFIASLGL YALLYDTIIY DDYGIHLSPF
AFDLAWQDLN ALLHSTSYIV TPIVIVIVEL TAANYLWKRI DKIQKKQWGN KVVLFVGICF
VSSHLFHIWA DATNMTEVTR FDDAYPVSYP ATARSFMENH GIDSSMQSTE SRNTKSRKLS
YPISPMQCTA DSQPNVMVIS IDSLRADMVD SVTMPFLSQY RIQNQRFMNH YSGGTDFETS
MFTLMYGLQG NYSDRKEFDS TSPILTNTLS QQGYQLAMFA PENDQYAANS AMFSGISIHI
SEGDNGSADA DINTINAVNA WQPKQTQPWF ALVNLTAPKD YDTPVGFLGV QTIKPHMALK
PAQKVLFNQY RQSLNFIDQQ LASLLNNVSD DTIVLITGTY GQVFTSNTSD ARSDLSPGNV
KVPLIIHWPD SHGNKVNYRT SHYGIAPTLL SHVLGCTNPS TDYSSGRSLL EPNNETWVYI
GDSRRFAIYQ KAEITVLDSF GKYRIYDLDY KKRLDKKMSA PELIQVMREG RRLYNQ