| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2486 |
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| Symbol | |
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| ID | 4279397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2971790 |
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| End bp | 2972464 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135282 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_751169 |
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| Protein GI | 114563656 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATAT TGGTTATTGA AGACGACCCT CTTTTATCAC ACCATCTACA GGTGCAATTA
TCTGCTCAAG GTAATCAAGT GCAAGTGGCA TTAACCGCAA AAGAAGGGTT TTATCAAGCC
ACTAATTATC CTATTGATGC TGCCATTATT GACTTGGGTT TGCCCGATCA AGATGGAATA
AGTCTCATCA AAATGCTGCG TAATGCAGAT GTTAAAGCGC CTATTCTAAT TTTAACCGCT
CGACTAACGT GGCAAGATAA AGTCGAAGGG CTCAATGCAG GTGCAGACGA CTACTTAGTT
AAACCATTTC AAAAAGAAGA ACTCATCGCC AGACTTGACG CTATAGTGCG CCGCAGCAGT
GGTTTTGTTC GCCCAACCAT CACCAGCGGT GCACTGCAAA TAGATGTTGC AGCAAAACAA
GTAACACTAA ATCAAACACC ATTAGAGATC ACTGCCTTTG AATACCTAAT TCTGGAATAC
TTGATGCGTC ATTGCCATGA GGTTGTCGCT AAACAGCGTT TACTGGATGT GGTCTATGCC
GACAAAGAAG GCGACCCCAA CACCATTGAA GTGATGGTCA GCCGATTAAG AAAGAAACTA
GCTCAAGGTG GAATAGAACA GTCCATCATT ACCCTTCGCG GCCAAGGATA TAAATTTAAT
CACCCATGCG ACTAA
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| Protein sequence | MRILVIEDDP LLSHHLQVQL SAQGNQVQVA LTAKEGFYQA TNYPIDAAII DLGLPDQDGI
SLIKMLRNAD VKAPILILTA RLTWQDKVEG LNAGADDYLV KPFQKEELIA RLDAIVRRSS
GFVRPTITSG ALQIDVAAKQ VTLNQTPLEI TAFEYLILEY LMRHCHEVVA KQRLLDVVYA
DKEGDPNTIE VMVSRLRKKL AQGGIEQSII TLRGQGYKFN HPCD
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