| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2481 |
|---|
| Symbol | |
|---|
| ID | 4279392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2966159 |
|---|
| End bp | 2967469 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638135277 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_751164 |
|---|
| Protein GI | 114563651 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAC AACGCAAGCT CGGGCTCACG AGCAAAATTT TAATTGGTAT GGCTGCAGGC
ATAATTTTAG GCCTGTTGTT AAGGAATGTG TTCCCAGACA GTCTATTCAT TAAAGAATAT
ATTACTGAAG GTTTCCTTCA TGTCATCGGT ACTATCTTTA TTTCAAGCTT AAAAATGCTC
GTTGTACCAT TGGTATTCAT TTCACTGGTG TGCGACACAA GCTCGTTAAG TGACCCGTCT
AAATTAGGTC GCCTAGGTGG TAAAACGATT GCTTTCTATT TATTTACCAC TGCAATAGCA
CTCACTATCG CGATTTTAGC CGCTGTACTT ATCCACCCAG GAAATGCCAG CCTTGCAGGC
AATGCTTTAG AATATACCGT TAAAGATGCA CCAAGTTTGT CCGAGGTTCT TATTAATATA
GTACCGACAA ATCCGATGCA AGCCATGAGT GAAGGCAATA TGCTGCAGAT CATTATTTTT
GCGGTAATTT TTGGATTTGC CATTTCTCAT ATTGGTGAAC GAGGTACTCG TGTTGCCTCA
TTCTTTAATG ATTTGAATGA TGTGATCATG CGAGTGGTGA CGTTAATTAT GCAACTGGCA
CCTTATGGTG TGTTCGCATT AATGGCTAAG CTGAGTTTAA CGTTGGGATT AGAAACATTT
GGTAGTGTCG TCAAATACTT CTTCCTCGTG GTTGCCGTTT TATTTATCCA AGGCTTAGTG
GTTTACCCGA CTTTATTAAA AATGTTCTCG GGTCTCAGCC CGTTAATGTT TTTACGTAAA
ATCCGCGACG TACAGCTGTT TGCTTTTAGT ACCGCAAGTT CTAATGCAAC ATTGCCGGTT
ACCATTGAAA CGGCTGAGCA CAGAATGGGC GTTGACAACA AAATAGCCTC ATTCACCTTA
CCACTCGGTG CCACACTCAA CATGGATGGC ACTGCCATTA TGCAGGGTGT TGCTACGGTA
TTTATTGCTC AAGTATTTGG TATTGAACTG AGCATCATGG ATTACGCTAC TGTTGTGGTA
ACGGCCACGC TGGCATCTAT CGGTACTGCG GGTGTGCCTG GTGTAGGCCT TATTATGCTG
GCAATGGTAT TAAACCAAGT AGGTTTACCT GTTGAAGGTA TTGCCTTGAT TATTGGTGTA
GACAGAATGC TAGATATGAT CCGCACAGCG GTGAACGTCA CTGGTGATGC GGTAGCCACA
GTGATCATTG CCAAATCTGA AGGCGAATTT AATGAAGAAG TATTCAACGA TTCGCAAGCA
GGTAAAGCCG CCAAAAGTTT TGAAGAGCAA GTGCTTAATG CCAAAAAATA A
|
|---|
| Protein sequence | MSKQRKLGLT SKILIGMAAG IILGLLLRNV FPDSLFIKEY ITEGFLHVIG TIFISSLKML
VVPLVFISLV CDTSSLSDPS KLGRLGGKTI AFYLFTTAIA LTIAILAAVL IHPGNASLAG
NALEYTVKDA PSLSEVLINI VPTNPMQAMS EGNMLQIIIF AVIFGFAISH IGERGTRVAS
FFNDLNDVIM RVVTLIMQLA PYGVFALMAK LSLTLGLETF GSVVKYFFLV VAVLFIQGLV
VYPTLLKMFS GLSPLMFLRK IRDVQLFAFS TASSNATLPV TIETAEHRMG VDNKIASFTL
PLGATLNMDG TAIMQGVATV FIAQVFGIEL SIMDYATVVV TATLASIGTA GVPGVGLIML
AMVLNQVGLP VEGIALIIGV DRMLDMIRTA VNVTGDAVAT VIIAKSEGEF NEEVFNDSQA
GKAAKSFEEQ VLNAKK
|
|---|
| |