Gene Sfri_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2476 
Symbol 
ID4279387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2955250 
End bp2956452 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content42% 
IMG OID638135272 
Productacetate kinase 
Protein accessionYP_751159 
Protein GI114563646 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACA AATTAGTACT CGTGCTCAAC TGCGGTAGCT CATCATTAAA ATTTGCCATC 
ATTGATGCTC AATCAGGCGA TGATAAAGTT TCTGGATTAG CTGAATGTTT TGGTTTAGAA
GATTCGCGCA TTAAGTGGAA ATTTGATGGC GGCAAGAATG AAGCCAAATT AGGTGCTTTT
ACTGCGCATC GCGAAGCGGT AGAATTTATC GTTAATAACA TCTTGGCAGA ACACCCAGAA
CTTGCGGCAC AAATTAAAGC CGTTGGTCAT CGTATCGTCC ATGGTGGCGA AAAGTTTACT
CGCTCGGTTA TTGTGACTCC TGAAGTCATT CAGGGTATTG AAGATTGTGC GTCATTAGCA
CCTCTGCATA ATCCTGCGCA TTTAATTGGT ATTCGTGCCG CACTTGCCTC ATTCCCAGCG
TTGCCACAAG TTGCAGTATT TGACACCGCA TTCCATCAAA CCATGCCCGA AAAGGCATAT
ATTTATGCCC TTCCTTACAA ATTGTATCGT GAACATAGCA TTCGTCGTTA TGGCATGCAT
GGTACTAGCA ATATCTATAT TTGTCGTGAA GCAGCCAAAG TCTTAGGCAA AGAGACTAAA
GACACCAATA TTATTTGTGC TCATTTAGGC AATGGCGCAT CAGTAACCGC GATTAAAGAT
GGTAAAAGTG TCGACACTTC AATGGGCTTA ACCCCGCTTG AAGGTTTAGT CATGGGTACA
CGTTGCGGCG ATTTAGACCC ATCAATTATT TTCCATTTAG TTAAACAACT TGGCTATACC
CTTGATGAAG TCAATAACCT ATTGAATAAG CAAAGTGGTT TACTGGGCAT TTCAGAGCTC
ACCAACGATT GTCGTGGTAT TGAAGAAGGT TATCAAGACG GTCACAAAGG TGCCACATTA
GCCTTAGATA TCTTCTGCTA TCGTTTAGCC AAATATATCG CCTCTTACAC TGTGCCATTA
GGGCGTTTAG ACGCCATTAT CTTTACTGGC GGTATTGGCG AAAACTCAGA CCTTATTCGT
GAGAAAGTGC TTAATTTATT AGCAATATTT AACTTCAAAG TCGATGATAA CTTGAATAAA
GCGGCTCGCT TTGGCCAGCA AGGCATCATT ACTCAAGTAG GTAGCCCAAT TGCTATGGTC
ATACCGACAA ATGAAGAGTG GGTTATTGCC GAAGATGCCA TTAAGCTAAT CACAGCCAAA
TAA
 
Protein sequence
MSDKLVLVLN CGSSSLKFAI IDAQSGDDKV SGLAECFGLE DSRIKWKFDG GKNEAKLGAF 
TAHREAVEFI VNNILAEHPE LAAQIKAVGH RIVHGGEKFT RSVIVTPEVI QGIEDCASLA
PLHNPAHLIG IRAALASFPA LPQVAVFDTA FHQTMPEKAY IYALPYKLYR EHSIRRYGMH
GTSNIYICRE AAKVLGKETK DTNIICAHLG NGASVTAIKD GKSVDTSMGL TPLEGLVMGT
RCGDLDPSII FHLVKQLGYT LDEVNNLLNK QSGLLGISEL TNDCRGIEEG YQDGHKGATL
ALDIFCYRLA KYIASYTVPL GRLDAIIFTG GIGENSDLIR EKVLNLLAIF NFKVDDNLNK
AARFGQQGII TQVGSPIAMV IPTNEEWVIA EDAIKLITAK