Gene Sfri_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2422 
Symbol 
ID4279333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2887800 
End bp2888123 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID638135218 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_751105 
Protein GI114563592 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CAATGACCCC CGCTGCGGCT GATCGAGTGA GATCGTTTCT TGCTAATCGC 
GGGAAAGGCC TCGGCTTGCG CCTTGGGTTG AGAACATCAG GTTGTTCAGG AATGGCATAC
GTCATTGAGT TCGTTGACGA TCTCAATGAC GATGATGAAC TTTATAATAT CGAAGGTGTA
AATATCATCA TCGATGCCAA AAGCTTCATT TATTTGCAAG GTATTGAACT TGATTTTGTC
AAAGAAGGCC TAAACGAAGG TTTTCAGTTC AATAATCCTA ACGCAAAGGG TGAATGTGGT
TGTGGTGAAA GTTTCACCGT TTAA
 
Protein sequence
MAISMTPAAA DRVRSFLANR GKGLGLRLGL RTSGCSGMAY VIEFVDDLND DDELYNIEGV 
NIIIDAKSFI YLQGIELDFV KEGLNEGFQF NNPNAKGECG CGESFTV