| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2418 |
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| Symbol | |
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| ID | 4279329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2883874 |
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| End bp | 2884770 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135214 |
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| Product | alpha-L-glutamate ligases, RimK family protein |
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| Protein accession | YP_751101 |
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| Protein GI | 114563588 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATCG CAATACTGTC TCAAGGCCCG CAATTATATT CTACTAAACG CTTAGTTGAA
GCTGCATTAG CTAGAGGACA TGAAGTCAAA GTTATTAATC CATTAAAGTG CTATATGAAT
ATCAATATGA CTAAACCTAG CATTCATATG GCGGGTAAGG ATCTGGGTCA TTTTGATGCT
GTTATCCCTC GTATTGGTGC TTCAGTGACC TTTTATGGTT CTGCAGTATT ACGTCAATTT
GAAATGATGG GCGTATATGC GGTTAATGGT TCAATTGGAA TTGCGCGTTC ACGAGACAAA
TTGCGTTCAA TGCAGCTGTT ATCTCGTCAA GGAATTGGGC TACCTATCAC TGGTTTTGCC
AATAAACCCA GTGATATACC TGATTTGATT GATATGGTTG GTGGTGCACC TTTAGTGGTT
AAATTGTTAG AAGGTACTCA GGGCATTGGC GTGGTATTAG CTGAAACCCG CAAAGCTGCA
GAGAGCGTGC TTGAGGCCTT TATGGGACTC AAAGCCAATA TTATGGTGCA AGAATATATT
GCTGAAGCAC AAGGCGCTGA TATTCGCTGT TTTGTGCTGG GCGATAAAGT GATTGCTGCA
ATGAAGCGCC AAGCAAAGCC AGGTGAGTTT CGCTCTAACT TACATCGTGG CGGCAGTGCT
ACTTTGGTTA AATTAACTCC TGAGGAGCGA TCAGTCGCGC TTCGCGCTGC AAAAACAATG
GGGTTAAATA TTGCTGGGGT TGATTTATTA CGTTCTAACC ATGGTCCGGT TGTGATGGAA
GTTAATTCCT CTCCTGGTTT AGAAGGTATT GAAAAAGCGA CCCAAAAAGA CGTTGCTGAT
GCCATTATTT GTTTTATGGA AAAAAATGCC AACAAGTCCA TCAAGTCAGC ACAATAA
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| Protein sequence | MRIAILSQGP QLYSTKRLVE AALARGHEVK VINPLKCYMN INMTKPSIHM AGKDLGHFDA
VIPRIGASVT FYGSAVLRQF EMMGVYAVNG SIGIARSRDK LRSMQLLSRQ GIGLPITGFA
NKPSDIPDLI DMVGGAPLVV KLLEGTQGIG VVLAETRKAA ESVLEAFMGL KANIMVQEYI
AEAQGADIRC FVLGDKVIAA MKRQAKPGEF RSNLHRGGSA TLVKLTPEER SVALRAAKTM
GLNIAGVDLL RSNHGPVVME VNSSPGLEGI EKATQKDVAD AIICFMEKNA NKSIKSAQ
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