| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2416 |
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| Symbol | |
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| ID | 4279327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2879956 |
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| End bp | 2882484 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135212 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_751099 |
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| Protein GI | 114563586 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG TCACATTAAC TGCTAAGGCA ATTCGCCGCA GTTTATTAGC TGTAGCAGCA
ACAAGTGTCG CGACAACAGG CTTATTTTCT TCAGTAGCAT TTGCTGCCGA TGAACAGAAA
GTTGAAAGAA TCGAAGTCAC CGGTTCTCGT ATTCAACGTC AAGACATGGA ATCTGCTTCT
CCAGTAACCA TCATTTCAGC TGAAGCTATT CGCGCAGAAG GTTTCACTTC AGTTGACCAA
CTACTTCAAG CCCAAACGTC AATGGCTGGT GCTGCTCTAG GTTCTAGCTC GAACAACGGT
TCAGACGGTG TTGCGCAAGT TGACTTACGC GGTATGGGTT CACAACGTAC GCTAGTACTA
TTAAATGGTC GTCGTATGGT TAACTCTGGT TCAGGTGCAG ATAGCTCTGT CGATTTGAAC
TCTATCCCTG TATCGATGAT ATCTCGTGTT GAAATCTTAA AAGATGGCGC ATCAGCAGTA
TACGGTTCAG ATGCTATCGC TGGTGTTGTT AACATCATTA CTAAGAAAGA TTTCGAAGGC
TTTCAACTAG ATCTTAACGG TAGTACTACC AGTGAAAGTG ATGGTGAAAC TGGCGAAATT
AGTGGTTTAT ACGGCTTCAA TACCGATGGT GGTAACTACA CTATTGGTGC TGCGTATTCG
AAACGCGAAA GTGTTATTCA GTCAGATCGT AGCTGGACAG AGCCTGGTGC AAGTTCATTT
TTACCTACAG GTTCATTAGG CGGGAAAGTA CGCAATGACG CTGGTGAATG GGTTGCTCGT
TCTACAGGTT ATGACTACAC CACTAGCAGT TATTACCAAA CACCAAACGA GCGTTACAGC
TTGTTTGCTA ATATGATCCA AGAATTAGAC AACAATTTAG TGCTAACAGG CGACGTGCTT
TACACTAAAC GTAAGTCTGA TCAGCAATTA GCTCCACAAC CTGCTGACGT AATGTTAAAC
GTATGTGGTG CTCCAGGTGT TACTGCTGGT GCAGCATGTA TTACACTTGA TCAAGCGATG
ACAGACGGTG AAATTGCTGC TGATGATACT GGTCGTGTAA ATTATCGTCG TCGTACTACC
GATGCCGGTC CTCGTATTTA TTCTCAAGAC ACTGATACTT TCCGTATCTC TGCTGCATTA
GCGGGTGAGC TTGATATTAA TACAGGCATG AACTGGGATA TCGGTTATAC CTATGGCAAA
AACAAAGCTG ATTCAAGTGT TGAGAACTCA ATCAATGCAA CCAATCTTAA GCAATCTGTT
TATGCTAACC AAGATGCATG GTTCACAGGT GTTCCATTAA CAGGTGAAAT CGTTAATGAC
ATTAGCTTCA CTGATAATGC TGACGGCGGC AATGAGCAAC ATGTTGTTTC TGCTGGTCTA
AATGGTGAGT TGTTTGATCT GAGTGCTGGT GCAGTTGCAT TTGCTATTGG TGCTGAATAC
CGTTATGAAA GCGGTTTTTA TAATCCAGAC CCTGTAACAG TGGCTGGTGA CAGTACTGCT
GCACAGCAAG ATGCTACAGA CGGCGATTAC AATGTATTGT CTGTATTCCA AGAAGTCAGC
GTTCCTTTCA CTGAAAAATT AACCGGTGAA TTTGCACTGC GTTATGACGA TTACTCAACA
TTCGGTAAAG CGTCTACTTG GAAAGTAGGT CTAACCTATG AAGCAACTGA TGATTTGATG
CTTCGTACTG TAGCGGCAAC AGGTTTCCGT GCTCCAAGCA TCAGTGAGTT ATTTGGTGGT
GACACTGGCT CTTACGACTA CTTGGATGAT CCATGGGGCA ATGCTCAGGA CCCACAGATT
CTAGTTCGTT ACACGTCTGA TGATGATCTA AAAGCTGAAG AGTCTGACTC TTATACAGCT
GGCTTAGTTT ACTCACCAAA CTATGTTGAA GGTCTATCGG TCACGCTTGA TTACTGGCGC
TTTAAAGTGT CCAATGCAAT CACTCGTTTA GATGTTCAAG CTGGTTTAGA AGAATGTTTT
GCTAATGCTT CAGCTGCAGC ATGTGAAACC TTTAACATTG GTGCAAACGG TGATTTATCT
AATCTTACTA ACTCGTTAAC AAACGTAGGT AGCCAAGACA CTAGCGGTTT AGACTTCAAC
TTAGCTTATA ACTTTGAAGC CTTGTCGTTA GATTGGAAAA TCAGCAATGA CACAACTTAC
TTGTTGAATT TCGAACAAGA AGACAATGAT TACACCAACA AGATCGATGG TAATTTTGGT
GCTTATGCAG AAGTTCGTAA CAACTTCAGC ATTCAAGCAG GTCAAGATAG CTGGAGTGTT
AACTACTTCA ACCGTTACAT TGGCGAAATG GACGATCTAA ATACAGGCGA TAAAGTGGAT
GCGATTCTGT ACCACAACTT AGCCGGTACT TATTATGTTA CTGACATGAT TACTCTAAGC
GCTGGTGTGA AAAACATCAC TGATGAAGAG CCATCAGGCG TATCGAATGG TAGTGATGGT
GGTACAGTAC CAGAAGTGTA TGACACTATT GGTCGCCAGT ACTACGGTGG CGTAACTGTT
AAGTTCTAA
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| Protein sequence | MSSVTLTAKA IRRSLLAVAA TSVATTGLFS SVAFAADEQK VERIEVTGSR IQRQDMESAS
PVTIISAEAI RAEGFTSVDQ LLQAQTSMAG AALGSSSNNG SDGVAQVDLR GMGSQRTLVL
LNGRRMVNSG SGADSSVDLN SIPVSMISRV EILKDGASAV YGSDAIAGVV NIITKKDFEG
FQLDLNGSTT SESDGETGEI SGLYGFNTDG GNYTIGAAYS KRESVIQSDR SWTEPGASSF
LPTGSLGGKV RNDAGEWVAR STGYDYTTSS YYQTPNERYS LFANMIQELD NNLVLTGDVL
YTKRKSDQQL APQPADVMLN VCGAPGVTAG AACITLDQAM TDGEIAADDT GRVNYRRRTT
DAGPRIYSQD TDTFRISAAL AGELDINTGM NWDIGYTYGK NKADSSVENS INATNLKQSV
YANQDAWFTG VPLTGEIVND ISFTDNADGG NEQHVVSAGL NGELFDLSAG AVAFAIGAEY
RYESGFYNPD PVTVAGDSTA AQQDATDGDY NVLSVFQEVS VPFTEKLTGE FALRYDDYST
FGKASTWKVG LTYEATDDLM LRTVAATGFR APSISELFGG DTGSYDYLDD PWGNAQDPQI
LVRYTSDDDL KAEESDSYTA GLVYSPNYVE GLSVTLDYWR FKVSNAITRL DVQAGLEECF
ANASAAACET FNIGANGDLS NLTNSLTNVG SQDTSGLDFN LAYNFEALSL DWKISNDTTY
LLNFEQEDND YTNKIDGNFG AYAEVRNNFS IQAGQDSWSV NYFNRYIGEM DDLNTGDKVD
AILYHNLAGT YYVTDMITLS AGVKNITDEE PSGVSNGSDG GTVPEVYDTI GRQYYGGVTV
KF
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