| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2407 |
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| Symbol | |
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| ID | 4279318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2871300 |
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| End bp | 2874119 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135203 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_751090 |
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| Protein GI | 114563577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000837393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTACC AAGTACTAGC CCGCAAATGG CGTCCAGCTA AATTTGAACA AATGGTCGGC
CAATCCCATG TATTAATGGC ATTAACCAAT GCATTGAGCC AACAACGTTT ACATCATGCT
TATCTGTTTA CTGGTACCCG CGGCGTGGGT AAAACCAGTT TGGCACGTTT GTTTGCTAAA
GGTCTTAATT GTGAAACAGG CGTTACTGCT ACGCCGTGCG GTGAATGCTC TAGTTGTATT
GAAATTGCCC AAGGCCGATT TGTTGATTTA ATTGAAGTCG ATGCCGCTTC CCGCACCAAA
GTTGATGATA CTCGCGAACT TCTCGACAAT GTACAGTATC GCCCATCCCG TGGTCGTTTT
AAGGTGTACT TAATTGATGA AGTACACATG TTGTCGCGCA GCAGTTTTAA CGCACTACTA
AAGACCTTAG AAGAGCCTCC TGAGCACGTT AAGTTTTTAT TAGCGACAAC CGATCCGCAC
AAACTGCCGG TTACTGTGCT ATCTCGTTGT TTACAGTTCA ATTTGAAAAG TTTATCGCAG
GACGAAATTA GCAAGCAACT TGAGTATGTT ATCACTCAAG AAAAGTTACC ATTTGAGTCG
CAAGCACTGA GTTTATTAGC CAAAGCGGCC AATGGCAGTA TGCGTGATGC GCTCAGTTTA
ACGGATCAAG CCATAGCATT TGGCAGTGGC CAAGTGATGC TTACACAAGT GCAAACCATG
TTGGGCAGTA TTGATGAGCA ACATGTGCTC GCGTTATTAA AAGCCTTGTG TGATGCCGAT
GTTGGGCCAT TAATGCAAAC CGTGGCAAAA GTATTGGCAT TTGGTGCAGA TGCCGAAGAA
GTACTACGCA GCTTATTAGA ACTATTACAT CAAATCACCT TAACTCAATT TGCCCCAGCC
GCAGCACAAC AATCGCTGTT TAGTGAGCAA ATTGTGGCAT TCGCGCAGCA ATTAGCACCT
GAACAAGTAC AGCTTTATTA CCAAATGCTG CTTAACGGCC GTAAAGATTT ACCCTTTGCT
CCCGATCCTA AATCGGGCTT GGAAATGGCA CTGCTTCGTG CGGTAGCCTT TACGCCCGAG
AAACAAGTAA AACGTTGGGT AACAACGACA CCAGCTAATA TTGATTTAAG CGTTATCGAT
CACGCATCAA CTTCAACACA AGAGGTCATT GAAACAGGCC CAAAGCCTGA TGCTCTGCCT
CAAGCGCATT ATGGTTTAAC GACAGCAGCA CAAGCTATTC AGGCTGAAGT GTTGCCGACT
GCCGAAGTTG AAGATGCTGA TCCTCTCGAC GATATCGCTG TTGAGCCTTC GTTGGCGGCT
GAGCAAGCTT TATTGTTGGA CCAAGCACAA AGCTTAGGGT TTGATTCATT GCCGCTAGAA
AGTGTCGATA TGCACACTGA CCAGCTTGTT AATGATGATG CCGAAGTTGA CGTTGTTAAT
GCAACTTCAT CTGATAATGT TGTTCATAGC GCAGATGCTG AAGCAACGGA TGAATCCAGT
ACTAAAAATG TGATAAGCGA TGTTATCGAG TCTGAAGAAG TTGCAGAGCA ACCTGCATTG
GCGCCAAGTA CGGCAGACAC CAATTCATTA GAAAATAGTC AATCCAGTGA TAGTGCAGAT
AATAGCTCAC TTGATGCCTA TTCTTTTATG GATTATAACG AAGCAGATGA TCCGTCAATG
GAATATCAAC CCTCTGATCA TGACGAATAT GTTGCGTTTT CTGCTTCAAG TGAGGCAACT
GACGTTAACC ATGTTACTGA AGCTTCGGAG TCGATGTCTA AACCGAAAAC GGTTAATCAT
CTCGCTGACG ATAACAGCGA CTTGATAAGT GATGATGCAC GTCAAAACCT CGCGAGTGAA
GATGATAACT TAGACGACTT TTTAGATGAA GTGCTAGCCA GTCGAGATTC TCTCATTGCA
GATGTTGGCG CATTACAGCA ACAAGAAGAA CTGGCCAAAA AAGAGTCGAC AAAAACAATC
AGTTCTAGAG TGAGCAAAGC GGCTGCGGCA TCAACATCAC CAACGGCCGC TACTGAGCCT
TCAGGTTCTG ATAAGTCAGA ACCTGCACCT AAGGCCAGCG AAGCGTCAAC GGCAACACTC
AGCGGAACAG ACAAGTCTCA AGTTGTGACA GATTATGATA GGCCACCTTG GGTCGCGCCC
AAAGAAGGTG AGAACGTTAA TGCGTTTGCA GATACTAATC AAGAGACTAA ACCAGCAGTT
GAAACAACAC TTCAACCATC GAATTCTGTC AGTCAGCAAG CCGGTCATCA ACATCAAAAA
CCAGCCAGCA CACAATCACT TGCTGCCGAT CCGCAAAACA TTAATGCAGA GCCGGTGATT
CAATCTAATG TGCTTGCCAA ATTTGAACCA CACAGCATTC AAGGCGATGA AGTTGATTTA
CATTGGTATA AAATAATGAC TAATGTGTCT GTTGGCGGGA GAGTTAGGCA ATTAGGGGTG
AACTCCGTGT GCCCAACATT GTCAAATCCA ATAGTATTAG TGTTAAAACC AGACCAGAAA
CATTTGTCTG CGCAAACTGC TATCGATCAA TTACAAGTGG CATTATCTGA GTACCTTGAG
CGACCAACTG AAGTTGAAAT CCAGATTGGT GTGGTGCAAA AACGAGAAAC ACCGCTTGAG
TTACGCAAAC GCTTTCATCG GGAGCTCATT GTGCAAGCGC AACAATCTAT TTTGCTTGAT
GACAACGTTC AGTGGATGAT CCAACACTTA TCGGCTCAGT TAGACAGTGA CACGATTGAA
TATCCATCGG AGCAACTAGG GCAAATAGCG CAGGATATTG CACTAATCAA CGCTTCATAA
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| Protein sequence | MSYQVLARKW RPAKFEQMVG QSHVLMALTN ALSQQRLHHA YLFTGTRGVG KTSLARLFAK
GLNCETGVTA TPCGECSSCI EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPSRGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPH KLPVTVLSRC LQFNLKSLSQ
DEISKQLEYV ITQEKLPFES QALSLLAKAA NGSMRDALSL TDQAIAFGSG QVMLTQVQTM
LGSIDEQHVL ALLKALCDAD VGPLMQTVAK VLAFGADAEE VLRSLLELLH QITLTQFAPA
AAQQSLFSEQ IVAFAQQLAP EQVQLYYQML LNGRKDLPFA PDPKSGLEMA LLRAVAFTPE
KQVKRWVTTT PANIDLSVID HASTSTQEVI ETGPKPDALP QAHYGLTTAA QAIQAEVLPT
AEVEDADPLD DIAVEPSLAA EQALLLDQAQ SLGFDSLPLE SVDMHTDQLV NDDAEVDVVN
ATSSDNVVHS ADAEATDESS TKNVISDVIE SEEVAEQPAL APSTADTNSL ENSQSSDSAD
NSSLDAYSFM DYNEADDPSM EYQPSDHDEY VAFSASSEAT DVNHVTEASE SMSKPKTVNH
LADDNSDLIS DDARQNLASE DDNLDDFLDE VLASRDSLIA DVGALQQQEE LAKKESTKTI
SSRVSKAAAA STSPTAATEP SGSDKSEPAP KASEASTATL SGTDKSQVVT DYDRPPWVAP
KEGENVNAFA DTNQETKPAV ETTLQPSNSV SQQAGHQHQK PASTQSLAAD PQNINAEPVI
QSNVLAKFEP HSIQGDEVDL HWYKIMTNVS VGGRVRQLGV NSVCPTLSNP IVLVLKPDQK
HLSAQTAIDQ LQVALSEYLE RPTEVEIQIG VVQKRETPLE LRKRFHRELI VQAQQSILLD
DNVQWMIQHL SAQLDSDTIE YPSEQLGQIA QDIALINAS
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