| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2375 |
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| Symbol | |
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| ID | 4279286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2830443 |
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| End bp | 2831771 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135171 |
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| Product | hypothetical protein |
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| Protein accession | YP_751058 |
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| Protein GI | 114563545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TTAGCCCAAT AGCATGGACA GAGGGCATGT TTCTTCGTCC ACAACATATG
CAGCAGCAAG AACGTTTTTT GCAACATCAA CAAGCGCGAA CTGCCAAGAA TAACAATCCA
CTTGCTTGGG GGGTTGTGAG CTATGAAGTA AATTATGGCC TACTTCCACT GGGGCAATTT
GGATTAGACC GCATCGATTG TGTTTTTCCA GATAACACCT TGGCTTGTCT TCCTGAGCAG
AGTCCGTTAC CAACGGCTAT TACTGTCCCA GCAGGTACAT TGGATCAACT TGTCTATCTT
GTTCTTCCCG TTGCTAAAAG CAATGGGATG AATATTTCAT CTTCTGAACA AAATCAAATT
ACTCGTTACA GCTATGAAGA TCACAACATT GTTGACACAA GCGTTGGGTC CGATGCTATG
GAAGTGCTGC AAGTTGCCAA ACTAGATTGT CGGTTAAAGT TACAAAGTGA AGACCGATCA
GGTTATGTTT CAATCGCGAT AGCTCGAGTT ATTGATGTGT CTGAAGAGGG CGTGATTCGA
TTAGATAAAA AGTTTATTCC GGCATGTATT GGCATTGAAC ACATCAAAAC CTTAATGAAT
ATGACAACTG AAGTCACCGG TATGATTAAT CAGCGTGCAG AAGCTATAGC CGGTCGCTTA
AGTCAATCCC AAGGGACTTC TAGTTCGATA GCAGACTTTT TAATGTTACA ACTTTTAAAT
AAGTACCAAC CCATTTTCGA ACATTATGGT GTTGTTAATC ACATTCATCC GGAATTGCTA
TTTCGCACAC TCATTAGTTT TTCTGGCGAA CTTTCAACGT TCAGCAGCCC CAACAAGCGA
CCGCCAAAAT TTCCAGTCTA TCAACATGAC AATTTAACCT ATGTATTTAG TAATACTATG
GTGATTGTGA ATCATGGTTT AAGTAGCGTA TTGGAGCAAA GTGCTACAGA GCTGATCCTA
GAAAAGACCA AATTTGGTGT ATATTTCTCG ACGATTGCAG ATAAAAGTAT GCTTGATAAT
GCTGAGTTTA TTCTTGCTGT TAAAGCAAAT GTTCCGCATG ACGAGCTTCG CCAACGCCTA
CCTTCGCAAA TTAAAATAGG GTCAGTTGAA ACCATTCGAG AGCTGGTAAA TAACCAATTA
CCAGGCATTG GAATATCCAA CCTACCAGTA GCACCAAGAC AGGTGCCATA CCATGCTGGT
TATCACTATT TTCAATTAGA TAAAAACAAC AGCCATTGGA TAAAGCTTAA ATCAAGTGGC
GGTGTAGCGA TGCATATTTC TGGTGCTTAT CCAGAGTTAC AAATAGAACT TTGGGCTGTG
AGTATTTAA
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| Protein sequence | MSDFSPIAWT EGMFLRPQHM QQQERFLQHQ QARTAKNNNP LAWGVVSYEV NYGLLPLGQF
GLDRIDCVFP DNTLACLPEQ SPLPTAITVP AGTLDQLVYL VLPVAKSNGM NISSSEQNQI
TRYSYEDHNI VDTSVGSDAM EVLQVAKLDC RLKLQSEDRS GYVSIAIARV IDVSEEGVIR
LDKKFIPACI GIEHIKTLMN MTTEVTGMIN QRAEAIAGRL SQSQGTSSSI ADFLMLQLLN
KYQPIFEHYG VVNHIHPELL FRTLISFSGE LSTFSSPNKR PPKFPVYQHD NLTYVFSNTM
VIVNHGLSSV LEQSATELIL EKTKFGVYFS TIADKSMLDN AEFILAVKAN VPHDELRQRL
PSQIKIGSVE TIRELVNNQL PGIGISNLPV APRQVPYHAG YHYFQLDKNN SHWIKLKSSG
GVAMHISGAY PELQIELWAV SI
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