Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2372 |
Symbol | |
ID | 4279283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2824844 |
End bp | 2825575 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135168 |
Product | hypothetical protein |
Protein accession | YP_751055 |
Protein GI | 114563542 |
COG category | [S] Function unknown |
COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGCG AACCTTTAAC ATCAGTAGGT TACTGTGGCA AAGTCCCCTC AAAAGGGGAT TTTATTCAGC AGAACTTAAA TGTTGATTTT CTTAAAAATT GGAATGACTG GTTACAAGCT GTTATTGCGG TGAGTAAAGA ACAAACCGAA CACAATTGGT TGGATTATTA TCTGACGAGT CCCATATGGC ATTTTTCGTT ATCTGCCGGT GTGTGTTGCG ACCAAGCCGT CGTCGGGACC GTCATTCCAA GTGTTGACCA TGTTGGTCGC CATTATCCAT TCACATTAGC CGGATTACAT AATCAATCGG CTTTAAGAGG TTGGAAAGAC AATCAGTGGG TTGAGGTTTT TGAACAGAAT ATATTACAAG TGCTTGAAGA TGATACTGTT CTTAGTAAAT GGTTAGATGC CATTACAAAA GAGACTTTAA CGGTTGCCGC CAATAACGAC AAGCTACTCG AGAGTGAATC GTTAGATCGC AACAAGAAAG CGTGGGTATT TCAAGGCGAC AATTCTCCTG ATGTACTTTT ATTACTGGAC CAGCAATACA GAAAACGCTT TGATCGTTAC AGCATTTGGT GGACAGAGGG CTCTGACGAT GTTGAACCGT GCACGATTAT TACGGAAGGC TTGCCACAGA TCAGTCAATT TATTTCTATG TTAAATGGTC AATGGCAACA ACGTGGTTGG AATACTGCAG AGCTCATTAA GGAGCAAACA TCATGCACTT AA
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Protein sequence | MSCEPLTSVG YCGKVPSKGD FIQQNLNVDF LKNWNDWLQA VIAVSKEQTE HNWLDYYLTS PIWHFSLSAG VCCDQAVVGT VIPSVDHVGR HYPFTLAGLH NQSALRGWKD NQWVEVFEQN ILQVLEDDTV LSKWLDAITK ETLTVAANND KLLESESLDR NKKAWVFQGD NSPDVLLLLD QQYRKRFDRY SIWWTEGSDD VEPCTIITEG LPQISQFISM LNGQWQQRGW NTAELIKEQT SCT
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