Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2368 |
Symbol | |
ID | 4279279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2820658 |
End bp | 2822151 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135164 |
Product | hypothetical protein |
Protein accession | YP_751051 |
Protein GI | 114563538 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGG AAGCTGCGTC ATTAGATGCT GTATCTGAAG AACAAGCACA AAGTGTTTCT ATTTTAGAGC AGGCCATTTT TGCAACCAAG CAAACCGATT CTTCGCGTGC TGAAGAGCTT ATTCGTTCAT TAACGGAAGA GGCCTTGAAA GGCACTGTGC AATGGGATAA AAACCTCACA GTTACTTTTA ACAAGGCAAT TACTCGTTTG GACGATATTA TTTCTAAGCA ATTAGCTGCC ATCATGCACA ATGAAGAACT GCAAAAACTG GAAGGCAGTT GGCGTGGATT GCATCATACA GTGAAAAACT CTGAAACAAA TGAAACGCTT AAAATTCGTG TCATGAGTTT GTCCAAAAAA GAACTTCACA AAGATTTGAG TAAAGCGGTT GAGTTTGATC AGAGTCAAAT GTTCAAAAAA ATCTATGAGG CTGAATTTGG CACCCCGGGC GGAGAACCTT ATGGTTGCTT AGTCGGTGAT TATGAGTTTA GTAATCATCC TGAAGATGTT GAAACATTAT CATTGATATC TAATGTTGCA GCCGCTGGCT TCTGCCCATT TGTTTCTGCT GCTGGTTCTT CTTTATTCGG TTTTGATGAG TGGACAGAAC TCAGTAAACC ACGCGATCTT GAAAAAGTAT TTGAATCTTT AGAATACACG CAATGGCGCT CTTTCCGTGA CAGTGATGAC TCTCGTTTTG TCACCTTAAC CATGCCACGT GTGCTTGCCC GTCTTCCGTA TGGTGAAGCA ACAAAACCTG TTGAAGAGTT TTGCTATGAA GAATTCGAAT TAGATTTAGA AAGTGGTCGT GCTAAAGTCG CTGATCACGA TGACTATTGC TGGATGAATG CCGCGTATGT CATGGCAACT AATATGGGGC AGGCATTTAG TAAATATGGT TTCTGTACCG CAATCCGTGG CGCCGAAGGT GGTGGTAAGG TTGAAGGATT ACCAGCTCAT GTATTTACCA GTGATGATGG TGATCCGGAT TTAAAATGCC CAACAGAAAT TGGCATTACC GATCGCCGCG AAGCTGAATT AAGTAAGTTG GGTTTCTTGC CTCTATGTCA TTACAAGCAT ACTGATTATG CCGTGTTCTT TGGCTCTCAA TCTTGCCAAA AACCTAAAAT AATGTCTAAC CATGATGCTA CCGCGAATGC GGCCATTTCT GCACGTTTAC CTTACCTAAT GGCAACATCA CGTTTTGCGC ATTATCTTAA AGTGATGGCT CGAGACAAAA TTGGTAGTTT CATGGAAGCT GAAGACGTCG AGTCTTGGTT AAATCGCTGG ATTTTATCAT TTGTTAATGC TTCAGAAGGT GGTGGGCAAG AGATTCGTGC CAAGTACCCA TTAGCAGATG CAAAAGTTGA AGTTAAAGAG ATCCCTGGTC AACCTGGTTC ATACAATGCT GTTGCATGGT TACGTCCTTG GTTACAAATG GAAGAACTGA CAGCCTCTTT ACGTTTAGTC GCGAAGATCC CTAAAGTAGG ATAA
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Protein sequence | MSMEAASLDA VSEEQAQSVS ILEQAIFATK QTDSSRAEEL IRSLTEEALK GTVQWDKNLT VTFNKAITRL DDIISKQLAA IMHNEELQKL EGSWRGLHHT VKNSETNETL KIRVMSLSKK ELHKDLSKAV EFDQSQMFKK IYEAEFGTPG GEPYGCLVGD YEFSNHPEDV ETLSLISNVA AAGFCPFVSA AGSSLFGFDE WTELSKPRDL EKVFESLEYT QWRSFRDSDD SRFVTLTMPR VLARLPYGEA TKPVEEFCYE EFELDLESGR AKVADHDDYC WMNAAYVMAT NMGQAFSKYG FCTAIRGAEG GGKVEGLPAH VFTSDDGDPD LKCPTEIGIT DRREAELSKL GFLPLCHYKH TDYAVFFGSQ SCQKPKIMSN HDATANAAIS ARLPYLMATS RFAHYLKVMA RDKIGSFMEA EDVESWLNRW ILSFVNASEG GGQEIRAKYP LADAKVEVKE IPGQPGSYNA VAWLRPWLQM EELTASLRLV AKIPKVG
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