| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2363 |
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| Symbol | |
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| ID | 4279274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2814941 |
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| End bp | 2815948 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135159 |
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| Product | hypothetical protein |
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| Protein accession | YP_751046 |
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| Protein GI | 114563533 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC AAGTAATGAA TAATCAGTTG CAGGCGATAA TCGATACGCC ATCAGAACAT
GACTTTTACC AAGCCGTTTA TCAGTTTCAA CAACAATTAT CTCAAGGGCG AGAGCAAGGT
TATAAGGTGG GTTATGACGC CATTCCCAGC CAAGAGTTGT TACGTTTTAA GTCTGATCAA
CATCTTGGTT TTCCAGGACA AGCAATCAGC AAAGTAGCGC CTACATCGAC AAGTCAAACT
GATAAAGTTG CCGCCGATTT GCATATATCA TTTATGGGAT TAACCGGACC CAGTGGTGTT
TTGCCTTCAC ATTATACTGA GTTGCTACTA GAGCGCCTGC GGCTTAAAGA TAATGGGATG
CGTGACTTTT ATGATTTATT TAACCATCGG CTGATCTCAC TATTCTATCG TTCATGGGAA
AAGTATCGTT TTTCGGCAAA TTATCAATCC CCTGAAACAG GCGTTACCGA CAGCTTTACC
CATGTATTGA GTTTGCTTAG TGGTAACAAA TCATTAAATC GCTATTACGC AGGTTTTTGT
CACACTAAAA CGCCGAGTGC TGAGTCGTTA CGAAGAATGC TAAATGATTT TACTGGCTGT
AATGTAAATA TTTTGTCTTT TCAAGGACGT TGGCAGTCTC TCGCGAAAAC AGAGCAAACC
CGAATGGCCA GTCGAAGTAT GCCAGAAGGG CAATACGCCC GTTTAGGTGT TGATGCCAGT
ATAGGTAACC GGGTATGGGA TATTAATTCA AGTGTCAGTA TTCATATAAA GCCGAAGGAA
GGCGCATCGG TTAACGCTTT TATGCCTGGA ACAGCCAGTT ATCAATCACT TAAAAAACTA
GTCTCAAACT ATTTAGGCCA GTCAGTGAAA TACAAAATTT TTCTAGAAAT AAAACAACAA
GATGCACCTA CAGCTCAATT ATCAAAGTCC GCAATCGGAC TAGGGTTAGG TTGTGGCCTA
ATGAGCCGTG CAGAGAATGG ACAACAAATA AAAAGCTTAA TGATTTAA
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| Protein sequence | MTQQVMNNQL QAIIDTPSEH DFYQAVYQFQ QQLSQGREQG YKVGYDAIPS QELLRFKSDQ
HLGFPGQAIS KVAPTSTSQT DKVAADLHIS FMGLTGPSGV LPSHYTELLL ERLRLKDNGM
RDFYDLFNHR LISLFYRSWE KYRFSANYQS PETGVTDSFT HVLSLLSGNK SLNRYYAGFC
HTKTPSAESL RRMLNDFTGC NVNILSFQGR WQSLAKTEQT RMASRSMPEG QYARLGVDAS
IGNRVWDINS SVSIHIKPKE GASVNAFMPG TASYQSLKKL VSNYLGQSVK YKIFLEIKQQ
DAPTAQLSKS AIGLGLGCGL MSRAENGQQI KSLMI
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