Gene Sfri_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2337 
Symbol 
ID4279249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2784084 
End bp2784806 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content45% 
IMG OID638135134 
ProductNAD-dependent deacetylase 
Protein accessionYP_751021 
Protein GI114563508 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGGC AAATTGTAGT GCTGACCGGC GCAGGTATTT CAGCTGAGTC GGGTATGAGC 
ACGTTTAGAG ATCAGCATGG TTTATGGGAA CAGCATCATA TTGAAGATGT TGCCACTCCT
GAAGGCTATG CAAGAGATAT CGAGTTAGTG GAGCGTTTTT ATAATAGCCG CTGGCAACAA
TTACACAGTG ATGATGTCAT TCCCAATGCT GCACATTTAG CGCTAGCGAA ACTTGAAACA
GAATTTACGG GTGAATTGCT AGTAATAACC CAAAATGTTG ATGATTTACA CGAGCGTGCG
GGGTCTAAAC GATTACTGCA TATGCACGGT GAATTAGCAA AAGGTCGATG CCCACAATCG
CTACAAACCT TTGTATTACG TGAACCTTTC GGTGTTGATA ATTGCTGCAC CTGTTGCATA
CCCGGGAAGC GCCTGCGGCC ACATATTGTG TGGTTTGGTG AAATGCCTTT TGGTATGGAC
AGAATTCACG ACGCTTTAGA CCACTGTGAC TTATTTATTG CGATTGGTAC ATCGGGTACG
GTTTATCCCG CGGCAGGTTT TGTCGATAGT GCGAATCACC ACGGTGCTCA AACCGTGGAG
GTTAATCTGG ATCCTGCAGA CCGTCATAGT CAGTTTCAAT ATCATTTTAC CGGTAAAGCG
GGTGCTATCT TACCTAAGTT AGTCGACGAT ATTTTAGCGG GTAAGGTGAT TGGTAGTGAG
TGA
 
Protein sequence
MYRQIVVLTG AGISAESGMS TFRDQHGLWE QHHIEDVATP EGYARDIELV ERFYNSRWQQ 
LHSDDVIPNA AHLALAKLET EFTGELLVIT QNVDDLHERA GSKRLLHMHG ELAKGRCPQS
LQTFVLREPF GVDNCCTCCI PGKRLRPHIV WFGEMPFGMD RIHDALDHCD LFIAIGTSGT
VYPAAGFVDS ANHHGAQTVE VNLDPADRHS QFQYHFTGKA GAILPKLVDD ILAGKVIGSE