Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2337 |
Symbol | |
ID | 4279249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2784084 |
End bp | 2784806 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135134 |
Product | NAD-dependent deacetylase |
Protein accession | YP_751021 |
Protein GI | 114563508 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACCGGC AAATTGTAGT GCTGACCGGC GCAGGTATTT CAGCTGAGTC GGGTATGAGC ACGTTTAGAG ATCAGCATGG TTTATGGGAA CAGCATCATA TTGAAGATGT TGCCACTCCT GAAGGCTATG CAAGAGATAT CGAGTTAGTG GAGCGTTTTT ATAATAGCCG CTGGCAACAA TTACACAGTG ATGATGTCAT TCCCAATGCT GCACATTTAG CGCTAGCGAA ACTTGAAACA GAATTTACGG GTGAATTGCT AGTAATAACC CAAAATGTTG ATGATTTACA CGAGCGTGCG GGGTCTAAAC GATTACTGCA TATGCACGGT GAATTAGCAA AAGGTCGATG CCCACAATCG CTACAAACCT TTGTATTACG TGAACCTTTC GGTGTTGATA ATTGCTGCAC CTGTTGCATA CCCGGGAAGC GCCTGCGGCC ACATATTGTG TGGTTTGGTG AAATGCCTTT TGGTATGGAC AGAATTCACG ACGCTTTAGA CCACTGTGAC TTATTTATTG CGATTGGTAC ATCGGGTACG GTTTATCCCG CGGCAGGTTT TGTCGATAGT GCGAATCACC ACGGTGCTCA AACCGTGGAG GTTAATCTGG ATCCTGCAGA CCGTCATAGT CAGTTTCAAT ATCATTTTAC CGGTAAAGCG GGTGCTATCT TACCTAAGTT AGTCGACGAT ATTTTAGCGG GTAAGGTGAT TGGTAGTGAG TGA
|
Protein sequence | MYRQIVVLTG AGISAESGMS TFRDQHGLWE QHHIEDVATP EGYARDIELV ERFYNSRWQQ LHSDDVIPNA AHLALAKLET EFTGELLVIT QNVDDLHERA GSKRLLHMHG ELAKGRCPQS LQTFVLREPF GVDNCCTCCI PGKRLRPHIV WFGEMPFGMD RIHDALDHCD LFIAIGTSGT VYPAAGFVDS ANHHGAQTVE VNLDPADRHS QFQYHFTGKA GAILPKLVDD ILAGKVIGSE
|
| |