| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2330 |
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| Symbol | |
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| ID | 4279242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2772992 |
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| End bp | 2774743 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135127 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_751014 |
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| Protein GI | 114563501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.188678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACGAT TCCCTAAATT AACACCGCTT TTTTTGAGCA CCGCATTAAC TCTTACACTT
TGTTATCCTG CACTTCATAT TGCTGACAGC CAGGCAAATG AAGCTTCAAT CTTTAGTGAA
ATGGCAACGG CTCAGCCAAT CTATGCTAAG CATGGCATGG TTTCAAGCCA AGAAGCATTA
GCCAGTCAAA TTGGCGTTGA AATTTTAAAA CAAGGTGGCA ACGCGGTCGA TGCGGCCGTA
GCAGTGGCCT ACGCCCTTGC AGTAACCTTA CCTCGCGCGG GTAATATTGG TGGAGGTGGC
TTTATGTTAG TGCATTTAGC CGAGCAAAAT AAAACCATTG CTATCGATTA CCGTGAAACA
GCCCCTGCTA AAGCACACAA AGATATCTTC CTTGATGAAC AAGGTAATGC TGTAGATAAA
CTCAGTCGTG AACATGGTTT AGCCGTTGGC GTACCAGGCA CTGTTATGGG GATGGAGCTG
GCCTTAAAAC AATATGGCAC CATGAAAATG GCGCAAGTGA TCAAGCCTGC GATTAAACTC
GCCAAAGACG GAATATTAGT CACTTCAGAT CTATCAAATT CATTAGCGGG TCTTAAATCT
CGTATTACCC AATGGCCAAG TTCGGCAGAG ATTTTCTACC ATGCCAACGG CAGTAATTAT
CAAGTCAATG AATTGCTCAA ACAACCCGAG TTAGCACAGT CATTATCTTT GATTGCCCAG
AAAGGTAGCA AAGGGTTTTA TCAAGGTGAA ACGGCTAAGA AAATTGTCTC TGCAGTACAG
AATGCGGGCG GCATAATGAG TTTAACTGAT CTGGCTAACT ATAAAGTGAT TGAACGCGAA
CCTGTGCGGG GTAATTACCG AGGTTACGAA GTGGTTTCTA TGCCGCCACC ATCTTCAGGT
GGTATCCATA TTATCGAAAT GCTCAATGTA CTCGAGCAAT TCCCCATTGA TAAATTAGGC
CACAACACCG CAAACACTTT GCATCTTATG GCCGAAACCA TGAAATATGC TTATGCAGAT
CGAAGTGAGT ATTTAGGTGA CCCTGATTTT GTTAATGTGC CAGTTAAACA ATTGACTAGC
AAAGAATACG CTAAAGAGAT TGCCAGCAAA ATCGCCATTA ATAAAACCAC ACCTAGCAGC
GAAGTGAAAC CTGGAAACCT TGCGCCGTAT GAGAGCGATC AAACTACCCA CTTCTCAGTT
ATCGATAAAT GGGGCAATGC CGTAGCTAAT ACTTATACTC TTAATTTTAG TTATGGTTCT
GGCTTAGTCG CTAAAGGCAC GGGCATTTTA TTAAACAATG AAATGGATGA CTTTTCGGCT
AAACCCGGCA CACCAAATGG TTATGGCTTA ATTGGTGGTG ACGCAAATGC GGTAGAAGGA
AATAAGCGTC CTCTCAGTTC AATGAGTCCT ACTATGGTGA TGAAAGATGG CAAACCTTTC
ATTGTTACCG GCAGCCCTGG TGGCTCGCGA ATTATTAATA TTACGCTGCA AATGATCATG
AATGTGATTG ATCATAACTT AAACATTGCC GAAGCAACTG CTGCTGCACG TATGCATCAC
CAATGGTTAC CTGATTTTAT TTGGGTGGAA CATACATTGA ATCGCGATAC GATTTCATTA
CTTGAAGCCA AAGGTCACAA AGTGAAAGTG CAAGAGTCGA TTGGCAGTAC TCAATCGATA
ATGATGACAG AGCAAGGTCT TTTTGGCGCT TCAGACCCAA GACGCGCAGG TTCTGCCGCC
ATCGGCTACT AA
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| Protein sequence | MTRFPKLTPL FLSTALTLTL CYPALHIADS QANEASIFSE MATAQPIYAK HGMVSSQEAL
ASQIGVEILK QGGNAVDAAV AVAYALAVTL PRAGNIGGGG FMLVHLAEQN KTIAIDYRET
APAKAHKDIF LDEQGNAVDK LSREHGLAVG VPGTVMGMEL ALKQYGTMKM AQVIKPAIKL
AKDGILVTSD LSNSLAGLKS RITQWPSSAE IFYHANGSNY QVNELLKQPE LAQSLSLIAQ
KGSKGFYQGE TAKKIVSAVQ NAGGIMSLTD LANYKVIERE PVRGNYRGYE VVSMPPPSSG
GIHIIEMLNV LEQFPIDKLG HNTANTLHLM AETMKYAYAD RSEYLGDPDF VNVPVKQLTS
KEYAKEIASK IAINKTTPSS EVKPGNLAPY ESDQTTHFSV IDKWGNAVAN TYTLNFSYGS
GLVAKGTGIL LNNEMDDFSA KPGTPNGYGL IGGDANAVEG NKRPLSSMSP TMVMKDGKPF
IVTGSPGGSR IINITLQMIM NVIDHNLNIA EATAAARMHH QWLPDFIWVE HTLNRDTISL
LEAKGHKVKV QESIGSTQSI MMTEQGLFGA SDPRRAGSAA IGY
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