| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2297 |
|---|
| Symbol | |
|---|
| ID | 4279209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2741234 |
|---|
| End bp | 2743660 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638135094 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_750981 |
|---|
| Protein GI | 114563468 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000505096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTGC CCTCGTGTGA AGTGGCCACT GAAATAAAAA CTTGCGGAGA TAAAACTGTG
CAGCAATACG TACTCTGGTA TCAAGAATTA GGCATGGGCG ATGTAAACAA GGTTGGCGGT
AAAAACGCAT CCCTTGGAGA GATGATCAGC AATCTGGCTA ATGCAGGGGT TCAAGTTCCT
GGCGGTTTTG CAACGACCTC GCATGCGTTC AATGAGTTCC TTGAACAAAG TGGAGTTAAC
CAGAAGATTT TTGACATTCT GGCGACATTG GATGTTGATG ATGTCAATGA ACTGGCAAAA
GTAGGTGCGC AGATCAGACA GTGGGTTATT GAAACCCCAT TCCAGCCGGC ATTAGAAGAC
GCTATTCGTG AAGCTTACGA GCAGTTGTCG AGTGAAACTC AAGAAGCGTC ATTTGCAGTG
CGTTCATCAG CTACCGCTGA AGACATGCCA GATGCATCTT TTGCAGGCCA ACAAGAAACA
TTCCTAAACG TTAAAGGTTT TGATGCGGTC ATGCTAGCAA TTAAGCATGT ATACGCCTCA
CTATTTAACG ACCGTGCAAT TTCTTATCGT GTTCATCAAG GTTACGAACA TCAAGGTGTG
GCTTTATCTG CTGGCGTACA ACGTATGGTA CGTTCAGACA AAGCAGCTTC TGGTGTGATG
TTTACCATGG ACACTGAGTC AGGAAACAAT GACGTTGTCT TTATCACTTC ATCTTTTGGT
TTAGGTGAAA TGGTTGTACA AGGCGCGGTT AACCCTGACG AATTCTATGT GCACAAACCG
ATTTTAGCGC AAGGGCATAA AGCTGTTGTG CGCCGAAATA TCGGCAGTAA GTTGATTCAG
ATGGTTTACT CTGATGATGC TGGCCATGGC AAGCAAGTTA AAATTGAAGA TGTTTCTGCT
GAACAGCGTC GTATTTTCTC TATTAACGAT GACGAAGTCA TGGAACTTGC TAAGCAAGCA
ATGGTGATTG AAAAGCATTA TGGCCGTGCG ATGGACATCG AATGGGCAAA AGACGGTAAC
GACGGTAAGT TGTATATTGT TCAAGCTCGT CCAGAAACAG TTCGTAGTCG TGAAGATGTC
CAGTTAATTG AACGTTATCA CTTAAAAACG AAGGGTGACG TGATCTGTGA AGGTCGTGCA
ATTGGTCATA AAATTGGTAC TGGTATCGCG AAGGTATTAA CATCGATTGA TCAGATGGAC
CAAATTGAAC CAGGTGACGT ATTAGTGACC GACATGACAG ACCCAGATTG GGAACCGATC
ATGAAACGTG CTAGTGCCAT TGTCACCAAC CGTGGTGGTC GTACTTGCCA TGCTGCAATC
ATTGCACGTG AATTAGGTGT ACCTGCTGTT GTAGGTTGTG GTGATGTGAC TGACCGAATC
AAAACGGGCG ACATTGTCAC TGTATCTTGT GCAGAAGGCG ATACCGGATT AATTTATTCA
GGTAAGCAAG ATTTTGAAAT CATCACTAAC CGTGTTGATA CATTACCTCC TTTGCCAATG
AAAATTATGA TGAACGTCGG TAACCCAGAT CGTGCATTTG ATTTTGCACG TTTGCCTAAC
GAAGGTGTGG GTTTAGCGCG TTTAGAGTTC ATCATTAACC GCATGATTGG TATTCACCCT
AAAGCTTTGC TTGATTTCAA CGGTCAAACT GCTGAACTGC AAAATGAAAT CAACGAAATG
ATTGCGGGTT ATGATTCACC TGTTGAGTTT TATGTTGCGC GTTTAGTTGA AGGTATTGCC
ACTATTGCAT CGGCTTTCTA TCCGAAGAAA GTTATCGTAC GTATGTCTGA CTTTAAGTCG
AACGAGTACG CAAACTTAGT CGGCGGTGAC CGTTACGAGC CAGATGAAGA AAACCCAATG
TTGGGCTTCC GTGGTGCTAG CCGTTATATT TCTGAAGCAT TCCGTGATTG TTTCGCGCTT
GAATGTGAAG CGATTAAACG TGTTCGTAAT CAAATGGGCT TAACCAACGT TGAAGTGATG
ATTCCATTTG TTCGTACTGT AAACGAAGCA TCTCAAGTGA TTGAGTTACT GAAAGAGCAA
GGTTTAGAGC GCGGTAAAGA TGGCTTACGC GTTATCATGA TGTGTGAACT ACCTTCAAAT
GCCTTGCTAG CTGACCAGTT CCTTGAGCAT TTTGATGGTT TCTCTATCGG CTCAAATGAC
TTAACTCAGT TAACATTAGG GCTTGATCGA GACTCAGGAA TCATCAGTCA CTTGTTTGAT
GAGCGTAATG ATGCAGTAAA AGCATTGCTT TCAATGGCTA TTAAAGCGGC TAAAGCAAAA
GGTGCTTATG TGGGGATTTG TGGCCAAGGC CCATCAGACC ATTCCGACTT TGCTGCATGG
TTAGTTGAGC AAGGTATTGA TTCTGTATCA CTTAATCCTG ATACCGTAAT TGACACTTGG
TTATATTTAG CTGAAGCACA TGGCTAA
|
|---|
| Protein sequence | MLLPSCEVAT EIKTCGDKTV QQYVLWYQEL GMGDVNKVGG KNASLGEMIS NLANAGVQVP
GGFATTSHAF NEFLEQSGVN QKIFDILATL DVDDVNELAK VGAQIRQWVI ETPFQPALED
AIREAYEQLS SETQEASFAV RSSATAEDMP DASFAGQQET FLNVKGFDAV MLAIKHVYAS
LFNDRAISYR VHQGYEHQGV ALSAGVQRMV RSDKAASGVM FTMDTESGNN DVVFITSSFG
LGEMVVQGAV NPDEFYVHKP ILAQGHKAVV RRNIGSKLIQ MVYSDDAGHG KQVKIEDVSA
EQRRIFSIND DEVMELAKQA MVIEKHYGRA MDIEWAKDGN DGKLYIVQAR PETVRSREDV
QLIERYHLKT KGDVICEGRA IGHKIGTGIA KVLTSIDQMD QIEPGDVLVT DMTDPDWEPI
MKRASAIVTN RGGRTCHAAI IARELGVPAV VGCGDVTDRI KTGDIVTVSC AEGDTGLIYS
GKQDFEIITN RVDTLPPLPM KIMMNVGNPD RAFDFARLPN EGVGLARLEF IINRMIGIHP
KALLDFNGQT AELQNEINEM IAGYDSPVEF YVARLVEGIA TIASAFYPKK VIVRMSDFKS
NEYANLVGGD RYEPDEENPM LGFRGASRYI SEAFRDCFAL ECEAIKRVRN QMGLTNVEVM
IPFVRTVNEA SQVIELLKEQ GLERGKDGLR VIMMCELPSN ALLADQFLEH FDGFSIGSND
LTQLTLGLDR DSGIISHLFD ERNDAVKALL SMAIKAAKAK GAYVGICGQG PSDHSDFAAW
LVEQGIDSVS LNPDTVIDTW LYLAEAHG
|
|---|
| |