| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2291 |
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| Symbol | |
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| ID | 4279203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2732799 |
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| End bp | 2735417 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638135088 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_750975 |
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| Protein GI | 114563462 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCAA CAAAGTGGCA CAGTTTACAA TCTGCAGATG TTCTACAGCG GCTTGATTCT
TCGCTAACGG GCCTGACTAC GGAACAAGCC AAAAAACGCC TGATTGAATA TGGTCATAAT
ACTATTATCC AAAAACCACG ACGTTCCTTG CTGTTCATTT TACTCGGGCA GTTTTCTGAT
TTCATGATAG TTGTGTTGTT GGTAGCAGCG GTGATTTCGG GTTTTCTTGG TGAGCCACAA
GATACCATTG CTATTATGGT GATCGTATTG CTTAATGCAA TTATCGGCAC AGTACAGGAA
TTTAGGGCAG AGCGCGCTGT GGCGGCACTG CGAAAAATGG CAGCGCCAGA TGCTTATGTA
TTTCGCGATG CACTTGAAGT GACGATTGAC GCAACAGCAT TAGTGCCGGG TGATGTTGTT
ATGCTTGAAG CCGGAAATAT TGTGCCTGCT GATGTGCGCT TACTGGAAGG GGAAGAACTG
CTGGTCGATG AATCAACCCT GACTGGTGAA TCACATGCAA TAGAAAAGCA AACAGAACCG
CTAGCTGATA AAGAATTAGC CATTGGTGAT CGTTTGAATC TAGTCTTTAA GAACAGCATG
ATTATTCGTG GACGTGGTAA AGGTGTGGTA GTTGCCAGCG GCATGGAAAC CGAGATAGGC
CAAATAGCTG GACTGCTACA AGATGAAACG AGTGTAAAAA CCCCCTTGCA AACACGATTG
TCTCGTTTTG GCCGATACCT TGCCTTGACT GTACTGGCAA TATGTATAGT GGTGTTTGTT
GTCGGCTTGC TGCAAGGACA GTCAATATTA TTGATGTTTT TAACCTCGGT GAGCTTGGGT
GTAGCTGCGA TACCGGAAGC ACTCCCTGCG GTGGTGACCA TTTCACTTGC TTTGGGTGCA
CGTAAGCTGA TCCGACATAA TGTGCTCGTG CGTAACTTAC CCTCTGTCGA AACCCTAGGT
TCAGTTACCT ATATATGTAC AGACAAGACC GGTACCCTGA CACAAAATCT CATGACAGCG
GAGTTATTTT TTGTCGCTGG AGAACTGCGA CAATCAATGC CTGAGTCAGA AGCCAGTATT
CCATGGACAG AGCTTGGCCA AGCCATGGCA CTAAACAATG ACATCATGGA TAAAGACGGC
AAACCTGCAG GTGAGCCGAC CGAGCTAGCA CTTTTCGAAG CCGCTCACAT GGTCGGTTTT
GATAAGTCCA TCTTAGAGCA GGCAAAGCCT CGTATAGCCG TTATTGCGTT TGATAGCGAA
CGTAAACAGA TGACAACCTT GCATCAAACA TCCGATGTTA TAACTGCGTA CATCAAAGGC
GCGCCAGAGC AGGTGCTACA ACAATGTATT CAGGGATTAA GTAATGATGG GGTTGCAGTA
TTTGAAGCGA CGGCCATACT GGCTGAAGCA GCACAGTTAG CGAATAAAGG TTACCGTGTA
CTGGCATTTG CAAAACGTGA ATTTAGCTGT TTGCCAGATC CGTTGGACGC TGAAGTGGTG
GAGCGAGAAC TCACCTTTTT GGGGCTGGTG GCGTTGATCG ATCCGCCGCG ACCCGAAGTG
CCTCAGGCCG TAAAAGATTG TCTCACAGCG GGAATTATTC CGGTAATGAT CACTGGCGAT
CATCCGGGTA CCGCGTTTGC GATAGCACAA CGTTTGGGCA TTATAGATAA CGATAGGGCG
ATGCTAAGTG GTGATCAACT CGCTAAAATA TCCGATGAAG AATTCTCCCG CCTAGTTGAC
TCAATATGGG TGTACGCAAG GGTGACACCG GAACAAAAAT TACGTATCGT CAAAGCGTTG
CAGGACAAAG GCGAATTTGT CGCTATGACT GGAGATGGCG TCAACGATGC GCCGGCATTG
AAGCGTGCCA GTATTGGTGT CGCCATGGGC CAGAAGGGAA CCGATGTGGC TCGCGAAGCT
GCGGATATGG TGTTATTGGA CGATGACTTT TCTTCAATCG TGCGAGCGAT ACGGTCGGGT
CGACGCACTT TCGATAATAT TCGCAAATTT ATTAAATATA CTTTGAGTTC CAATGCTGGT
GAAATCTGGA CCTTGTTCCT TGCACCGTTT CTCGGGTTGC CTATTCCTTT ACTGCCGATT
CATATCCTGT GGATTAACCT AGTGACCGAT GGTCTGCCGG GTCTTGCATT AACCGCCGAG
CCAGCCGAAC CGAATATAAT GAGTCGTGCG CCCAGCCCTC CAAAGGAAAG TATTTTTTCT
CATGGTATGT GGCAACATAT TCTCTGGGTA GGATTGTTTA TTGGTGGAAT ATCCATTGCG
ACTATGGCGT GGGCTATTTC TCGTGACGTT GTTTACTGGC AGACAATGGT GTTTACGGTA
TTAACGGTAT CGCAGTTGTT TCACTCACTG GCGGTTCGCA GTGAGAGTAC TTCATTATTG
CGTATTGGTT TGTTCAGTAA TTTACCGATG TTAGGGGCTT TTCTGTTAAC GTTGCTATTT
CAGATGGTCG TGATTTATAC ACCTGCGTTA AACACCATTT TCCATACACA GCCTCTGCCA
ATGGTCGATC TTATTGTCTG TCTGTTGTTG TCTTCACTTA TTTTGTTTGC CGTCGAGATT
GAAAAATGGT TAATGCGTCG TGGTGTTATT TACGCATAG
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| Protein sequence | MSSTKWHSLQ SADVLQRLDS SLTGLTTEQA KKRLIEYGHN TIIQKPRRSL LFILLGQFSD
FMIVVLLVAA VISGFLGEPQ DTIAIMVIVL LNAIIGTVQE FRAERAVAAL RKMAAPDAYV
FRDALEVTID ATALVPGDVV MLEAGNIVPA DVRLLEGEEL LVDESTLTGE SHAIEKQTEP
LADKELAIGD RLNLVFKNSM IIRGRGKGVV VASGMETEIG QIAGLLQDET SVKTPLQTRL
SRFGRYLALT VLAICIVVFV VGLLQGQSIL LMFLTSVSLG VAAIPEALPA VVTISLALGA
RKLIRHNVLV RNLPSVETLG SVTYICTDKT GTLTQNLMTA ELFFVAGELR QSMPESEASI
PWTELGQAMA LNNDIMDKDG KPAGEPTELA LFEAAHMVGF DKSILEQAKP RIAVIAFDSE
RKQMTTLHQT SDVITAYIKG APEQVLQQCI QGLSNDGVAV FEATAILAEA AQLANKGYRV
LAFAKREFSC LPDPLDAEVV ERELTFLGLV ALIDPPRPEV PQAVKDCLTA GIIPVMITGD
HPGTAFAIAQ RLGIIDNDRA MLSGDQLAKI SDEEFSRLVD SIWVYARVTP EQKLRIVKAL
QDKGEFVAMT GDGVNDAPAL KRASIGVAMG QKGTDVAREA ADMVLLDDDF SSIVRAIRSG
RRTFDNIRKF IKYTLSSNAG EIWTLFLAPF LGLPIPLLPI HILWINLVTD GLPGLALTAE
PAEPNIMSRA PSPPKESIFS HGMWQHILWV GLFIGGISIA TMAWAISRDV VYWQTMVFTV
LTVSQLFHSL AVRSESTSLL RIGLFSNLPM LGAFLLTLLF QMVVIYTPAL NTIFHTQPLP
MVDLIVCLLL SSLILFAVEI EKWLMRRGVI YA
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