Gene Sfri_2243 details

Gene Information

• Locus tag: Sfri_2243
• Symbol: dcd
• ID: 4279155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2687777
• End bp: 2688361
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638135040
• Product: deoxycytidine triphosphate deaminase
• Protein accession: YP_750927
• Protein GI: 114563414
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTAA CCGATATAGA AATTGAGCAA TGTTTAGATA ATGGCACCAT TATTATCGAT 
CCTCGTCCTG GTATTGAAGC CATTTCGGGA GTGAGCGTGG ATGTACGTTT AGGCAGCCAA 
TTTCGTGTAT TTAAAGACCA TACTGCACCT TACATCGATT TAAGTGGTCC TAGTGCAGAA 
ATGCAAATAG CACTTGATCG GATCATGAGC GACAAAATTG AAATCGCTGA TGATCAAGCT 
TTTTTCCTTC ATCCTGGAGA ATTAGCATTA GCCGTTACCT ATGAAAGTGT AACCTTACCT 
GCTGATATAG TGGGTTGGTT AGATGGTCGC TCATCACTTG CTCGTTTAGG ATTGATGGTA 
CATGTGACCG CACATCGTAT TGATCCAGGT TGGCAAGGCA AAATCGTACT TGAGTTCTTT 
AACAGTGGTA AATTGCCGTT GGCTCTTCGC CCTGGTATGA CGATTGGTGC GCTAAATTTT 
GAGCGCTTAA GCTCTGCGGT TGCTCGTCCA TATAACACGC GTAAAAGCTC GAAGTACAAA 
GATCAACAAG AGGCTGTAGC AAGCCGGATC AGCCAGGATA AATAA 

 

Protein sequence

MRLTDIEIEQ CLDNGTIIID PRPGIEAISG VSVDVRLGSQ FRVFKDHTAP YIDLSGPSAE 
MQIALDRIMS DKIEIADDQA FFLHPGELAL AVTYESVTLP ADIVGWLDGR SSLARLGLMV 
HVTAHRIDPG WQGKIVLEFF NSGKLPLALR PGMTIGALNF ERLSSAVARP YNTRKSSKYK 
DQQEAVASRI SQDK