| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2228 |
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| Symbol | |
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| ID | 4279140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2671345 |
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| End bp | 2673396 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135025 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_750912 |
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| Protein GI | 114563399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.128038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAAC TTACCTTGGC CGCGTCAATT GCCAGTTTAT TTGTCGGCTT TTCGGCATGG
GCAATTTCAC CAACGATTCA AATCAGCGAG TTACCTAAAC TAGCACAAGA GCCACAACAT
AAAGTGGCTA GCAAGCGAGT AACAACTTTG TTTACTCGCT CGCATTATCA TCGTTTTGTA
CTTGATGATG CATTCTCTGA ACAAATATAT ACCCGTTTTC TTGAGCAACT TGATTATCGT
CGTAATGTGC TGACAGCGGC AGACATTGCG AGCTTTAGTC AATATCAAAA CCAGTTTGAT
AACATGGTCG AATCAGGCGA TATTAGCCCT GCATTTACCA TGTACGATCT AGTACAAAAA
CGTCGTTATG AGCGTTTTGC TTATGCTTTG TCTTTGCTTG ATAAAGAGTT CGACTTTACT
CAAGCTGGCG ATGCGTATGA ATTTGATCGC AAAGATGCGC AGTGGCCAAA AGACGAAGCC
GAAGTGAATG AACTTTGGCG TCAACGCGTT AAATATGACG CACTAAATCT AAAGTTAACC
GGTAAAAAGT GGCCTGAAAT TGTTGAAGTG CTCGAGAAGC GTTATAACAA TGCCATTAAG
CGTTTAAGCC AAACACAAAG CGAAGACGTG TTTCAAACAG TCATGAATGC GTTTGCTCGT
AGTGTTGAGC CTCATACCAG TTATTTATCA CCTCGTAATG CAGAACGTTT CCAAATGGAA
ATGAATTTAA GTCTCGAGGG GATCGGTGCT GTGTTGCAAA TGGATGATGA CTACACTGTC
ATCAAAAGTT TAGTGGCCGG AGGGCCGGCG GCCAATAGCG AGAAATTATC ACCAGAAGAT
AAAATTGTTG GTGTTGGTCA AAAAGACGGT GACATTGTTG ACGTCATAGG TTGGCGTTTA
GATGATGTTG TTGATTTGAT CAAAGGGCCA AAAGGCAGCG AAGTCGTATT ACAGATTTTG
CCGAAAAAAG GCGGGGCGAA TGCTAAACCT TTTGAAGTTG TCATTACCCG AGATAAAATT
CGTTTAGAAG ACCGTGCTGC GACGTCAAAA GTGGTTGAGC CTAAAGAAGG CCAGTATGCC
AATCGTAAAG TCGGGGTGAT TCAAATCCCT GGGTTTTATA TGAATTTGTC ACAAGATGTG
GCCAAAGAAA TCACTAAACT TGAGAAAGAC AATGTTGAAG GGATTATTAT TGACCTTCGT
GGCAATGGCG GTGGGGCATT AACCGAAGCG ACATTGCTCA CTGGCTTGTT TATTGATATG
GGGCCAGTTG TTCAAATCCG TGATGCTAAT GGTGGCATTA ATCAAAATCG TGATAATGAT
GGCGCCAGTG CTTACAATGG CCCACTTACT GTGATGGTTG ATCGTTATAG TGCATCGGCT
TCAGAGATTT TTGCTGCAGC TTTACAAGAT TATGACCGCG CACTTATTGT CGGTGAATCG
ACCTTTGGTA AAGGGACTGT TCAGCAACAT AAAAGCTTGG GTCGAATTTA TGACATGTAC
GAAAAGCCAA TCGGTCATGT GCAGTATACC ATTGCTAAGT TTTACCGTAT TAATGGCGGC
AGTACTCAGT TAAAAGGTGT CACACCTGAT GTGCGCTTAC CGAGTGCTTT AGAGCCTGGT
GAATATGGTG AGTCGGAAGA AGAAAATGCA TTACCATGGG ATAAAGTACC TGTAGCGCAG
TACACTACTT TAGGGAATAT TACCCCTATG TTGATTAACA ATCTTGATGT TAAACATAAA
GAGCGTATCA GCCAAGATGT AGAGTTCAGT TATATTTACC AAGATATTAA TGAGTTTAAA
AAACATCACA AAGACAAAAC AATATCGCTT GTAGAGAGTG AACGTATTGC TTCTCGTGAA
GACGATGATA AGCGTGCTCT AGATCGAGCC AATGCGCGTC GAGTTCACGA AGGTTTAGCT
GCTGTGAAGT CTTTAGACGA TATTGAAAAA ACAGATGATA GCAAATTACC TGATGCCTTT
TTAGATGAAA CGGCTTATAT CACTCTAGAT ATGGCCGACG TAGAAAAAAT AGCTAAAACT
AACTCAAAGT AA
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| Protein sequence | MRKLTLAASI ASLFVGFSAW AISPTIQISE LPKLAQEPQH KVASKRVTTL FTRSHYHRFV
LDDAFSEQIY TRFLEQLDYR RNVLTAADIA SFSQYQNQFD NMVESGDISP AFTMYDLVQK
RRYERFAYAL SLLDKEFDFT QAGDAYEFDR KDAQWPKDEA EVNELWRQRV KYDALNLKLT
GKKWPEIVEV LEKRYNNAIK RLSQTQSEDV FQTVMNAFAR SVEPHTSYLS PRNAERFQME
MNLSLEGIGA VLQMDDDYTV IKSLVAGGPA ANSEKLSPED KIVGVGQKDG DIVDVIGWRL
DDVVDLIKGP KGSEVVLQIL PKKGGANAKP FEVVITRDKI RLEDRAATSK VVEPKEGQYA
NRKVGVIQIP GFYMNLSQDV AKEITKLEKD NVEGIIIDLR GNGGGALTEA TLLTGLFIDM
GPVVQIRDAN GGINQNRDND GASAYNGPLT VMVDRYSASA SEIFAAALQD YDRALIVGES
TFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IAKFYRINGG STQLKGVTPD VRLPSALEPG
EYGESEEENA LPWDKVPVAQ YTTLGNITPM LINNLDVKHK ERISQDVEFS YIYQDINEFK
KHHKDKTISL VESERIASRE DDDKRALDRA NARRVHEGLA AVKSLDDIEK TDDSKLPDAF
LDETAYITLD MADVEKIAKT NSK
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