Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2209 |
Symbol | |
ID | 4279121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2643293 |
End bp | 2645113 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135006 |
Product | AsmA family protein |
Protein accession | YP_750893 |
Protein GI | 114563380 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG TAAAGTGGTT GTTAGCGATA GTGCTAACCA TAGTGGTCGG TATAACCGTC TACCTCACAA TGTTTTTCGA TTTAAATAAT TTTAAACCGC AAATTGTTGA TGCGGTAAAA AAACAAACTG GCCGTGACTT ACAAATCAGC CAAGATTTAA GCTGGAGCGT GTTTCCATCT TTAGGCATCA AGCTCGGGGG CATTTCGTTA TCGAACCCAA ATGGGTTTAC ACCCGCTGCG ATGCTTGATG TTAATGAGGC CGTGGCCAAT GTGGCGTTGA TGCCATTGTT TAGCCAACAA ATAGAAGTTG ATTTATTAAA GCTAGATGGC TTAACACTTA ACTTAGTCAC TCAAAAAGAC GGCAAGACTA GTTTTGATGG TTTGACTGCT GAAACATCGG CAGAAAAACC ACAATCAACC TCAAGCAATT CAGAGGCAAT GTCTTTACAG ACGTTAGATA TTGGCGGTAT TGAACTTACC AATACGAATA TCAATATTAT TGATATGGCC AGCAATACGA CTCAAACTTT CAGTCTAAAA AGTTTTACTT TAGGACAGTT CAGCCTAGGA CAATTCGCTG ATTTTGCTTA CGAGTTTTCA GCGACACTGC CTGATATGCA GTTAGCGTCA TCTGGACAAG GCAAAATTAA AGTCGACCAA GCATTACAGA ATGTCACGAT TAATGATTTT GACATGGTGC ATAAAGCCCA AGGCGATAGT TTGCCAGGCA AAGCGATTAC CGCTGAGCTG AGTACACAAA TGAAGATGGC ATTAGATGCA AAAACCATTG AGCTGCAATT GACTAAAATG TCAGCTATGG ACTTAGCCGC CACTGGCGAT ATTAAGATCA ACTATGGTAA TAGCATTCCT AAAATTGCGA TGAATCTTGA TGTTGGTGAT ATTGATGTCG ATGCATTACT GCCAAAGCAA GAAGGCGATG CCAAAGAAAA TGAGGCAACT CCTGAAACTG CACCAAGCAA AGAACCTGAT TTGTCGGGAT TAAAGAGTGT CGATTTAACC CTAAACTTAA CCGCTAAATC AATTAAAGTT AGTAATATGC TAACGCAAAA TTGGCAAATG AAAATGGCCG TTAATAAAGG CGTATTAACG TTGTCGTTGC TGACTGCCGA TTTATATGAA GGTAAGCTAG CACTTAGCGC TAAGCTTGAT GGTCGTAAAG CGGTACCAAC TTATGTGTTT GATAAAAAGT TGACTGGGGT GCAAATTCGT CCGTTATTAA CCGATGCCGC TGAAGTAGAT TTGCTTTCTG GAACAGCGAG TTTTGAAGTT AAAGGTAGTG GTGCCAGTTT GATTGTCGAT AATCTTAAAA ACAATCTTAA TGCCGTGGGT AAGTTTGAAG TAGCAGATGG ATCATTGTAT GGAGTTAACA TTCCACAGAT GATCCGTAGC GCACAGCAAA AGCTGAAAGG TGATTTATCG GCGGATAAGA AAGAAGAGTT GAAAACCGAT TTTACCAGTT TAACTGGAAG TTTCACCATG AAAGATGCTG TTGTAACTAA CCCTGATTTA GCGATGGCTT CACCGTTAAT TCGCTTAAAT GGTAAAGGTA CGGCAAACAT TGCTACTGAA GCGTTAGATT ACACCTTAAC AACCAGTGTC GTTGGGTCAT TATCAGGACA AGGCGAACCT GCTGATGAGT CTCTTAAAGG TATCGACATT CCGTTAACTA TTAAAGGTAC TTTCCAAGAG CCTAAGTTTG GCATTGATAC CAAAGCGTTA TTGGAAGGCC AATTTAAAGA TGAAGCAGAT AAAGCCAAAG AAAAGCTAAA AGAAGGATTG TTTAAGAAGC TTGGAATTTA A
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Protein sequence | MKVVKWLLAI VLTIVVGITV YLTMFFDLNN FKPQIVDAVK KQTGRDLQIS QDLSWSVFPS LGIKLGGISL SNPNGFTPAA MLDVNEAVAN VALMPLFSQQ IEVDLLKLDG LTLNLVTQKD GKTSFDGLTA ETSAEKPQST SSNSEAMSLQ TLDIGGIELT NTNINIIDMA SNTTQTFSLK SFTLGQFSLG QFADFAYEFS ATLPDMQLAS SGQGKIKVDQ ALQNVTINDF DMVHKAQGDS LPGKAITAEL STQMKMALDA KTIELQLTKM SAMDLAATGD IKINYGNSIP KIAMNLDVGD IDVDALLPKQ EGDAKENEAT PETAPSKEPD LSGLKSVDLT LNLTAKSIKV SNMLTQNWQM KMAVNKGVLT LSLLTADLYE GKLALSAKLD GRKAVPTYVF DKKLTGVQIR PLLTDAAEVD LLSGTASFEV KGSGASLIVD NLKNNLNAVG KFEVADGSLY GVNIPQMIRS AQQKLKGDLS ADKKEELKTD FTSLTGSFTM KDAVVTNPDL AMASPLIRLN GKGTANIATE ALDYTLTTSV VGSLSGQGEP ADESLKGIDI PLTIKGTFQE PKFGIDTKAL LEGQFKDEAD KAKEKLKEGL FKKLGI
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