| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2207 |
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| Symbol | |
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| ID | 4279119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2640286 |
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| End bp | 2641065 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135004 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_750891 |
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| Protein GI | 114563378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.181464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAACG TTCACGCCAT TCCAGCTTTT AATGACAACT ACCTTTGGTT AATTCATCAA
ACAAGTAGCC TTGATGCTTA CGTAGTTGAT CCAGGCTGTG GCCAAAGTGT TATCGATTAT
TTAGCCACCA CAGAACTTAA CTTAGTCGGT ATTCTCATTA CCCACCACCA CAGCGACCAC
ACTGGCGGTA TAAAACAACT GCAACAGCAC TTCAACAATA GTCTTATTGT TTATGGTCCG
AGTAACGAAC GTATCGATGG TTTAACTCAC CCATTAACAG TTACATCGGA TATAAATATT
GAGATACCTC ATTTAGGGCT TACTCAGGTG ATAGCCGTAC CAGGACATAC TTTAGGTCAT
ATTGCCTACT ATATTGATGA TAAATTATTT TGTGGCGATA CCTTATTCAG TGGCGGGTGT
GGACGGTTAT TCGAAGGCAC TCCGACGCAA ATGCTGCAAT CGTTGACCGT GTTGGCAAAC
TTACCCGACC AAACCCAAGT TTTCTGTGCT CATGAATACA CACAATCCAA CCTTAATTTC
GCCTTACATG TCACACCCAA TAATTTACAG TTGATTGATT ATGCCCATAA AGTTAATCAA
TTACGCTCAC AAAACATACC AACCATCCCT AGCACAATCG CGACAGAAAA AGCCATAAAC
CCGTTCCTAC GTTGTCATAT AAATGAGACT CAAGTCGCAA TATCAACAGA ATACAAAATA
GTAAATATAG ATGATATTCA GACATTTACA TTATTAAGGG AATGGAAAAA TCAATTTTAG
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| Protein sequence | MLNVHAIPAF NDNYLWLIHQ TSSLDAYVVD PGCGQSVIDY LATTELNLVG ILITHHHSDH
TGGIKQLQQH FNNSLIVYGP SNERIDGLTH PLTVTSDINI EIPHLGLTQV IAVPGHTLGH
IAYYIDDKLF CGDTLFSGGC GRLFEGTPTQ MLQSLTVLAN LPDQTQVFCA HEYTQSNLNF
ALHVTPNNLQ LIDYAHKVNQ LRSQNIPTIP STIATEKAIN PFLRCHINET QVAISTEYKI
VNIDDIQTFT LLREWKNQF
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