| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2204 |
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| Symbol | |
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| ID | 4279116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2637837 |
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| End bp | 2638565 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135001 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_750888 |
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| Protein GI | 114563375 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000174809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACATTA TTTCTAGTGC AAGTCGTCAA GTGATCCTCG ATACCGAAAC TACCGGTATG
AACCAAGCGG GTGGACCTAT TTATGTGGGC CATCGCATTA TTGAAATTGG TTGTGTCGAA
GTGATTAATC GTCGCTTAAC AGGCCGAACG TATCACCAAT ATATTAATCC TGGTCAAGCG
ATTGATGAAG AGGCAATTCA AGTTCACGGT ATTACCAATG ACCGTGTGGC CAACGAACCG
CGTTTTCATC AAATAGCCAA AGATTTTATC GATTTTATCG ATGGTGCTGA AATTGTCGCT
CATAACGCCA ACTTCGATGT GAGCTTTATG GACCATGAGT TTTCAAAACT CAATCCAATT
GGGCCTAAAA CCAAAGACAT TTGCAGTATT CTCGACAGTT TGGCCATTGC CAAACGTCTG
CATCCAGGCC AAAAAAACAA TCTAGATGCA TTGTGTCGAC GTTATGGTAT CGATAATGGC
CGCCGTACTT ATCACGGCGC ATTACTCGAT GCGGAAATTC TTGCTGATGT TTACTTAATC
ATGACTGGTG GACAAATTAA GTTTAATTTG TCCAATGAAA AAGCGGGTCA AGAAGGTGGC
GGAATTAAAA ATATCGATCC TTCGGCGTTT AATCTTAAAG TCGTTGGTGC ATCTGCCGAT
GAAATACTAT TACACGAACA ACGACTTGAC CTCATTGCGA AGTCAGGTAA ATGTCTCTGG
AGAGGGTAA
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| Protein sequence | MNIISSASRQ VILDTETTGM NQAGGPIYVG HRIIEIGCVE VINRRLTGRT YHQYINPGQA
IDEEAIQVHG ITNDRVANEP RFHQIAKDFI DFIDGAEIVA HNANFDVSFM DHEFSKLNPI
GPKTKDICSI LDSLAIAKRL HPGQKNNLDA LCRRYGIDNG RRTYHGALLD AEILADVYLI
MTGGQIKFNL SNEKAGQEGG GIKNIDPSAF NLKVVGASAD EILLHEQRLD LIAKSGKCLW
RG
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