| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2183 |
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| Symbol | |
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| ID | 4279095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2608932 |
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| End bp | 2609684 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134978 |
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| Product | hypothetical protein |
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| Protein accession | YP_750867 |
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| Protein GI | 114563354 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGAC ACAGTAAATG GGCCAATATA AAACATCGTA AAGCCGCACA AGATGCTAAA
CGCGGTAAGC TGTTTACCAA ATTTATTCGA GAGCTTACCG TCGCCGCTCG TGAAGGCGGT
TCAGATGTTG ATGCCAACCC CAGATTACGC GCTGCAGTTG ATAAAGCCTT ATCCAATAAT
ATGACCCGTG ACACCGTTGA ACGTGCAATC AAACGCGGTG CCGGTGAAAT GGATGGTCAG
CAATTAGAAA CCATTATTTA TGAAGGCTAT GGTCCTGGTG GTACAGCGGT CATGGTTGAA
ACGATGACCG ATAATCGAAA TCGCACCGTT TCTGGTGTGC GCAATGCTTT TAATAAGTCG
GGTGGTAACT TAGGTACCGA TGGTTCAGTG GCGTATTTGT TTACCAAATC TGGCATTATT
TCTTATGACA CCGATATTGA TGAAGATAGC TTAATCGACA GTGCATTAGA CGCTGGTGCA
GAAGATGTTA TTACTCATGA TGATGGCTCT ATCGATGTAT TTACCACTCC TGATGCCTTT
GGCAAAGTAA AGGATGCACT TGATAGTGCT AGTTTTGGAT CTGTTCATGC TGAAGTGACT
ATGGTTGCAT CATTAAAAGC TGAACTTGAT GCCGATACCG CCGAAAAATT TTTACGTTTA
ATCGATATCT TAGAAGACCA TGATGATGTA CAAGAGGTAT ATCATAATGC TGAGATATCA
GATGACGTTA TGCAAGCGTT AGACAACGCA TGA
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| Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDVDANPRLR AAVDKALSNN
MTRDTVERAI KRGAGEMDGQ QLETIIYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFNKS
GGNLGTDGSV AYLFTKSGII SYDTDIDEDS LIDSALDAGA EDVITHDDGS IDVFTTPDAF
GKVKDALDSA SFGSVHAEVT MVASLKAELD ADTAEKFLRL IDILEDHDDV QEVYHNAEIS
DDVMQALDNA
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