Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2180 |
Symbol | ruvB |
ID | 4279092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2606748 |
End bp | 2607758 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134975 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_750864 |
Protein GI | 114563351 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.729966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAG CTGATCGACT AATCCAACCG CAGGTACAAG GTCAAGATGA ACTGATTGAT CGTGCTATGC GCCCTAAAAT GTTGGATGAG TATACCGGTC AAGATGATAC TCGAGCTCAG CTTAAGGTTT TTATTCAAGC CGCGATAAAT CGTCGTGAAG CCCTCGATCA CATGCTGATT TTTGGTCCTC CAGGTTTGGG GAAAACAACG TTAGCCATGA TTGTGGCTAA CGAAATGGGC GTGAATATCA AATCCACTTC TGGCCCTGTG CTTGAAAAAG CGGGTGATTT AGCGGCATTA TTAACCAATC TTGAAGAAGG TGATGTGCTG TTTATTGATG AAATCCATCG CTTAAGCCCT GTAGTGGAAG AAATTCTTTA TCCAGCAATG GAAGATTACC AACTGGATAT TATGATTGGT GATGGTCCAG CCGCGCGTTC AATTAAATTG GATTTGCCGC CATTTACTCT TATCGGCGCC ACGACTCGTG CTGGTGCATT AACCTCGCCA TTGCGGGCTC GTTTTGGTAT TCCATTACGT TTAGAGTTTT ATAACGTCGC AGACTTAACC ACAATTGTAA CTCGTTCAGC CAACGTAATG AACCTTGAGA TAGATGAACA AGGGGCTATT GAAATTGCTA AGCGTTCACG CGGAACTCCG CGAATTGCCA ATCGATTATT ACGTCGAGTA CGCGATTATG CCGAAGTAAA GCATGACGGT AAAGTGTCTC AAACAGTGGC TGAATATGCA TTGGATTTAT TGGATGTAGA TGACCAAGGT TTTGATTACT TAGACCGTAA ATTATTATTG GCCATTATTG ATAAATTTAT GGGTGGCCCT GTTGGATTAG ACAATCTAGC GGCAGCCATC GGTGAAGACC GCGAAACAAT TGAAGATGTA TTGGAGCCTT TTTTAATTCA ACAAGGGTTT ATTCAACGCA CGCCAAGAGG GCGTATCGCT TCTCAAAGAG CCTATGATCA TTTTAGTTTG GTTAGACCTG AAAAAGCTTA A
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Protein sequence | MIEADRLIQP QVQGQDELID RAMRPKMLDE YTGQDDTRAQ LKVFIQAAIN RREALDHMLI FGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLEEGDVL FIDEIHRLSP VVEEILYPAM EDYQLDIMIG DGPAARSIKL DLPPFTLIGA TTRAGALTSP LRARFGIPLR LEFYNVADLT TIVTRSANVM NLEIDEQGAI EIAKRSRGTP RIANRLLRRV RDYAEVKHDG KVSQTVAEYA LDLLDVDDQG FDYLDRKLLL AIIDKFMGGP VGLDNLAAAI GEDRETIEDV LEPFLIQQGF IQRTPRGRIA SQRAYDHFSL VRPEKA
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