| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2169 |
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| Symbol | asnC |
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| ID | 4279081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2590807 |
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| End bp | 2592207 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134959 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_750853 |
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| Protein GI | 114563340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTG CATCTGTCGC TTCTGTATTT AAAGGTGAAC ACGCCGTTGG TTCGCAAGTC
ACTGTCCGTG GCTGGGTAAG AACTCGTCGT GATTCAAAAG CGGGTATCTC TTTCTTGGCC
GTGTATGACG GTTCATGTTT CGACCCTATT CAAGGTGTCT TGCCTAATAG CCTAGCCAAT
TACAATGACG ATGTATTGAA ATTGACTGCT GGCTGCTCTG TCGTAATGAC GGGTGAAGTA
GTTGCCTCTC CAGGCGCTGG TCAAGCATTT GAATTACAAG TCACTGAAAT TGTGGTCACA
GGTTTTGTTG ACGATCCAGA TACTTACCCA ATGTCGGCCA AACGCCACTC TATTGAGCAT
TTACGTGAAC TTGCCCATTT ACGCCCACGT ACCAACATTA TTGGTGCCGT AGCTCGTGTT
CGTAACTGTT TATCGCAAGC GATTCACCGC TTCTATCATC AAGAAGGTTT TATCTGGGTA
TCGACCCCGT TAATTACAGC TTCTGACTGT GAAGGTGCTG GCGAAATGTT CCGTGTGTCT
ACTTTAGACA TGGAAAATCT ACCTCGCACA GCTGAAGGTA AAGTCGATTA CGATAAAGAT
TTCTTCGGTA AAGAATCATT CTTAACCGTG TCAGGTCAGT TAAACGCTGA AACGTATGCT
TGTGCATTAT CTAAAGTGTA TACCTTTGGC CCAACGTTCC GTGCCGAAAA CTCAAACACC
ACTCGCCACC TTGCAGAATT CTGGATGGTT GAGCCTGAAG TGGCATTTGC AACGTTAGAT
GATGCGGCTG AGTTAGCGGA AAAAATGTTG AAATTCGCGT TTAGCGCAGT GCTTGAAGAA
CGCATGGATG ATTTAAACTT CTTTAACGAA CGTGTTGATA AAACCGTTAT CGAACGTTTA
CAAGCATTCG TAAGCAGTGA TTTTGCTCAA GTGGATTACA CAGATGCAGT TGAAATCCTT
AAAAACTGTG GTAAGAAGTT TGAATTCGCA GTTGAATGGG GTATTGATTT ACAATCTGAG
CACGAACGCT ACTTAGCTGA AGAGCATTTT AAAGCGCCTG TTGTTGTTAA GAACTACCCG
AAAGACATTA AAGCTTTCTA TATGCGCTTA AACGATGATG GCAAGACTGT TGCCGCAATG
GACGTGTTAG CACCAGGTAT TGGTGAAATT ATCGGTGGCG CACAGCGTGA AGAGCGTTTA
GACGTGTTAG ATGCACGTTT AGCTGAAATG GATTTAAGCC AAGAAGATTA CTGGTGGTAT
CGTGACCTAC GTCGTTATGG CACCGTACCT CATTCAGGTT TTGGTTTAGG TTTTGAGCGT
TTAGTGTCGT ATGTGACTGG CGTTAACAAC ATTCGTGATG TTATCCCATT CCCACGCGCC
CCACGCTCAG CCAGTTTCTA A
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| Protein sequence | MSIASVASVF KGEHAVGSQV TVRGWVRTRR DSKAGISFLA VYDGSCFDPI QGVLPNSLAN
YNDDVLKLTA GCSVVMTGEV VASPGAGQAF ELQVTEIVVT GFVDDPDTYP MSAKRHSIEH
LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHQEGFIWV STPLITASDC EGAGEMFRVS
TLDMENLPRT AEGKVDYDKD FFGKESFLTV SGQLNAETYA CALSKVYTFG PTFRAENSNT
TRHLAEFWMV EPEVAFATLD DAAELAEKML KFAFSAVLEE RMDDLNFFNE RVDKTVIERL
QAFVSSDFAQ VDYTDAVEIL KNCGKKFEFA VEWGIDLQSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NDDGKTVAAM DVLAPGIGEI IGGAQREERL DVLDARLAEM DLSQEDYWWY
RDLRRYGTVP HSGFGLGFER LVSYVTGVNN IRDVIPFPRA PRSASF
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