Gene Sfri_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2157 
Symbol 
ID4279069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2568885 
End bp2570306 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content42% 
IMG OID638134947 
Productpara-aminobenzoate synthase, subunit I 
Protein accessionYP_750841 
Protein GI114563328 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0147] Anthranilate/para-aminobenzoate synthases component I 
TIGRFAM ID[TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.169831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCGC GGGCAAAAAA CGCACTATTT ATGCAAAAAC TGGACTGGAA AATAGATACA 
AAGCAGCTAT TTTCACTGGT AAGCCACCAG CCATGGGCGA TATTACTCGA CTCAGCCAAT
GCTCCGCACC AAGATGCCAA ATTCGACATC ATCGGCTTTA ATCCTATTGC AACGTTAACT
AGCAGTGATG GCGTCTGTCA ATTTAGTAGC AAAGATCCAG CCATTGAAAC ACTCAACATT
AAAATAGATA GCCACGCCAA CCCTTTTAAC ACATTAGCTA AACTGCATGC GCGGTTATAT
CCTTCAGCGC AAGAAAGCCA ACATCCATTT AGTGTCGGAG CCCTGGGCGC ATTTGGCTAT
GACCTGGGCC GAAATATTGA AAAGCTGCCA CAAATTTCCA TTAAAGATAT TCATCTTGAT
GATATGAATA TTGGTTTTTA TGATTTTTCA CTCGTCTACA GTTACGTTGA TAAATCTTGG
TATGCTTACC ATTACTGTGG TTCTTACGCG TTAAAAGTTG AGTTGAATTT AATTGAATCT
AAAATACAAA AATCAGCCAG TAACGCGATA ACATCAAGGC CTTTCAGATT AACTACGGCT
TGGAGTAATC AGATAGACAG TCAGCAGTAT CAACATAAAT TTGCTCAAGT GCAGCAGTAT
TTATTGAGTG GTGATTGTTA TCAAATCAAT TTAACCCAAC GATTTGAAGC TCAATATCAA
GGAGATGAAT GGCAAGCTTA TTGTGCTTTA TCCCTTGCAA ACCAAGCGCC TTTTTCGGCA
TTTATGCGAG TTGATAACCA CTGCATGTTA TCTATCTCAC CAGAACGTTT TATTAAACTT
AACGATCAAT ATATCGAAAC TAAACCCATT AAAGGTACCA TGCCGCGCCA TCATGATCCC
ATTTTGGATC AACAAGCCGC TAGCGCATTA ATCACTTCCG AGAAAGATCG TGCCGAAAAT
GTGATGATTG TAGACCTACT AAGAAACGAT ATCGGTAAAG TCGCCGCCCC AGGCTCGGTT
AAAGTGCCGA CGTTATTCGC CATTGAAAGC TTTCCTGCGG TGCATCATTT AGTCAGTACG
GTGACTGCCA CACTTGCACC ACACAAAACA GCATTCGATT TACTTAACGC CGCCTTTCCA
GGTGGGTCAA TTACCGGTGC GCCAAAAATC CGCGCAATGG AAATCATTGA AGAATTAGAA
CCGTCCAGAC GTAATCTTTA TTGCGGCAGC ATCGGCTATA TAAGCCAAAA CGGAAACATG
GACACCAGTA TAACCATTCG TACTTTGGTC ACTGAAAAAA ACCACATTTA CTGCTGGGCA
GGTGGTGGTA TTGTTGCCGA CTCTAATGGT GCCGCGGAAT ATCAAGAAAG CTTTGATAAA
GTCAGTAAAA TATTACCTTT GTTGACGAGT TTGAATCAGT AA
 
Protein sequence
MSARAKNALF MQKLDWKIDT KQLFSLVSHQ PWAILLDSAN APHQDAKFDI IGFNPIATLT 
SSDGVCQFSS KDPAIETLNI KIDSHANPFN TLAKLHARLY PSAQESQHPF SVGALGAFGY
DLGRNIEKLP QISIKDIHLD DMNIGFYDFS LVYSYVDKSW YAYHYCGSYA LKVELNLIES
KIQKSASNAI TSRPFRLTTA WSNQIDSQQY QHKFAQVQQY LLSGDCYQIN LTQRFEAQYQ
GDEWQAYCAL SLANQAPFSA FMRVDNHCML SISPERFIKL NDQYIETKPI KGTMPRHHDP
ILDQQAASAL ITSEKDRAEN VMIVDLLRND IGKVAAPGSV KVPTLFAIES FPAVHHLVST
VTATLAPHKT AFDLLNAAFP GGSITGAPKI RAMEIIEELE PSRRNLYCGS IGYISQNGNM
DTSITIRTLV TEKNHIYCWA GGGIVADSNG AAEYQESFDK VSKILPLLTS LNQ