Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2145 |
Symbol | |
ID | 4279057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2552902 |
End bp | 2554746 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134934 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_750829 |
Protein GI | 114563316 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000233078 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTA AACCCTCGTT TTTAAAAAGG ATGTTTTTAC TGTTATGGAA TACAGTAAAC GGTATCCGTA AGTTCATCAT CAACGTAATA TTTTTTGGTT TGTTGGCTGT CATCACTGTG GTACTTCTCA ACAGCGAAGA TGAAATTGTC GTCGAAGATC AATCAGCATT AGTGCTGAAC TTGTCTGGGA GCATAGTGGA CCAAAAACAT TATGTAGACC CAATAGAAAT GGCATTTAGC CAAGGGCAAG CGAATGATCC AGAAGGTGAA ATTCTATTAG CTGACGTACT TTATACAATT AATAATGCGA CTCAAGACGC CCGCATTACC AGTATCGTAT TGGACTTAGC TGATCTTCGT GATGCCGGCA TTAGTAAAAT GACCGCCATT GGTGAAGCAT TAACTCAGTT TAAAGCAGCC AATAAGTCAG TTATCGCAAT GGCCAATGGT TATGATCAAA ATCAATATTT TTTAGCCAGC TTTGCAGACA AAATATACCT TAATAACCAA GGTATGGTAG CGCTTGATGG CTTAAGCCGT TATCGCTTAT ATTACAAAGC AGCACTCGAA AAACTCAAAA TTACCACTCA CGTATTTCGA GTGGGAACGT TTAAGTCAGC TGTAGAGCCC TTTATTCGTG ACGATATGTC TGATGCCGAC AAAGTCGCCA GCAAAGAATT GTTAAATGAT ATTTGGCAAA GCTACTCGAC TATTGTTGCC AGCAACCGTC AAATCGCTCC AGATCAATTA GTGTTAAGTA CAGATGAGTA TCTCGCTCAG CTTGATAAAG CTGAAGGTGA CAGTGCTCAA ATGGCTGTAA ACATGAAATG GGTTGACGAA CTGGTTTCGG CTGATGCATT CCGTGTCGCT ATGATTGAAC GTGTAGGCAG TGATAAAGAA GGTAAAAACT TTAAGCAAAT TAGCTTTAAT GATTACCGAA CATTAACCGC ACCAATGCCT AAATTTGTTG AACAAGACGC AGTGGCCGTT ATCGTTGCTA AAGGCACGAT TCTTAACGGT AAACAACCTG CCGGACAAAT TGGTGGCGAA AGTACCTCTG CATTGCTCAT GAAAGCACGC TTTGACGATA AAGTGAAAGC CGTCGTACTT CGTGTTGACA GCCCTGGTGG TAGTGCATTT GCATCAGAGC AAATTCGTCA AGAAGTGTTA GCGCTAAAAG CTGCAGGTAA GCCTGTGGTT GTTAGCATGG GTAGCCTTGC TGCATCTGGC GGATATTGGA TATCAGCCAG TGCCGACTAT ATTGTGGCTA CGCCAACAAC CCTAACAGGT TCAATCGGTA TTTTCGGTAT GTTCGCTACG TTTGAGCAAG CTCTTAATCA TTTTGGTGTA ACCTCTGATG GTGTCGCAAC ATCTGATTGG GCAGGTTTAT CGCCTGCACG TGAATTAAAC CCACAAGTTG CCGCGGTAGT ACAACGTCAT ATTGAACGTG GTTACCATGA GTTTATTTCT CTGGTAGCAA AAGAGCGTCA TATGACGCTA GAGCAAGTAG ACAATATTGC TCAAGGCCGT GTATGGACAG GTAAACGCGC ACTCACCTTA GGCCTAGTTG ATGAACTGGG TGATATGGAT GTGGCATTAG CCAAAGCTGC TGATTTAGCG AAAATGGACA AGTTCGACGT TAAAGTGATT GAGCAAGAGC TAAGCGCTGA ACAACAACTG ATGCAGCAAA TCATGGGCGC TACTGTGGCT TATGTTCCAG ACAGTGTTCG TCAAACTAGT TTCATTGAAC GCTTTGCCAA GCAGTGGGCT GGTGCATTTG AAACATTGTC GATGTTTGAT GACCCTAATC ATGTCTATAT GTATTGCGAA AACTGTAATT ACTAA
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Protein sequence | MSAKPSFLKR MFLLLWNTVN GIRKFIINVI FFGLLAVITV VLLNSEDEIV VEDQSALVLN LSGSIVDQKH YVDPIEMAFS QGQANDPEGE ILLADVLYTI NNATQDARIT SIVLDLADLR DAGISKMTAI GEALTQFKAA NKSVIAMANG YDQNQYFLAS FADKIYLNNQ GMVALDGLSR YRLYYKAALE KLKITTHVFR VGTFKSAVEP FIRDDMSDAD KVASKELLND IWQSYSTIVA SNRQIAPDQL VLSTDEYLAQ LDKAEGDSAQ MAVNMKWVDE LVSADAFRVA MIERVGSDKE GKNFKQISFN DYRTLTAPMP KFVEQDAVAV IVAKGTILNG KQPAGQIGGE STSALLMKAR FDDKVKAVVL RVDSPGGSAF ASEQIRQEVL ALKAAGKPVV VSMGSLAASG GYWISASADY IVATPTTLTG SIGIFGMFAT FEQALNHFGV TSDGVATSDW AGLSPARELN PQVAAVVQRH IERGYHEFIS LVAKERHMTL EQVDNIAQGR VWTGKRALTL GLVDELGDMD VALAKAADLA KMDKFDVKVI EQELSAEQQL MQQIMGATVA YVPDSVRQTS FIERFAKQWA GAFETLSMFD DPNHVYMYCE NCNY
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