Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2144 |
Symbol | |
ID | 4279056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2550723 |
End bp | 2552738 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134933 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_750828 |
Protein GI | 114563315 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000426277 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTC CACACTTATT AGAACCTTTA GATCTAGGCT TTACACAGCT GAAAAACCGC GTGTTGATGG GCTCTATGCA CACGGGTTTA GAAGAAGAAA AAGGCGGATT TGAGAAACTG GCAGCATTTT ATAAAGAACG TGCTCAAGGT GGCGTAGGGT TAATTGTTAC CGGCGGTATT GCCCCTAATT TGCGCGGCCG TCTAGCGCCA CATGCCTGCC AATTGAGCTT TTCTTGGCAG GTGGGAAAAC ATAAAATTGT TACCGATGCC GTGCATGAAG CGGGCGGTAA AATCTGTATG CAAATCTTAC ACGCTGGCCG TTATAGTTAT CATCCTTTTA GTCTAGCGCC GAGCAAAGTA AAATCGCCCA TTACCCCGTT CACTCCCTCT GCGATGTCTG CTCGTCAAGT ACGCTCGACG ATTAAAGACT ACGCTACCAG CGCGGCATTG GCGAAAAAAG CCGGCTATGA TGGCGTTGAA GTCATGGGGT CTGAAGGCTA TTTGATCAAC CAATTCATCA GTTCGCGCAC CAATAAACGT AACGATGAAT GGGGCGGAAG TTATGAAAAT CGGGTTAAAT TCCCGATTGA AATCGTTAAT GCTATTCGCC AGAAGGTTGG CAGTGACTTT ATTATTGTGT TCCGTTTATC GATGCTCGAT TTAGTCGATA ATGGTTCAAC GTGGGACGAA GTCGTAAAGC TGGCAAAATC GCTTGAACAA GCTGGTGTAA GTATTATTAA TACCGGTATT GGTTGGCATG AAGCCCGTGT ACCGACGATT TCGACCAGTG TACCGCGTGG GGCATTTTCT TGGGTAACCG AAAAACTCAA AAAAGAAGTC AAGGTGCCGT TAATTGCTAC AAACCGGATT AATACTCCAG AAATTGGCGA GTCGATTATT GCATCAGGTC AAGCTGATAT GGTGTCGATG GCCCGGCCAT TTCTTGCCGA CGCTGAGTTT GTGAATAAAG CGGCAGCTAA TACCCCTGAA TTGATTAATA CCTGTATTGG TTGTAATCAA GCTTGTTTGG ACCACACCTT TTCGATGAAG CGGGCAACCT GTTTGGTTAA TCCCCGTGCT TGTTATGAAA CCGAAATTAA TTTTACCCCA ACAACCAGTA AAAAACGTAT CGCTGTTATG GGCGCCGGTC CTGCGGGAAT GGCGTTCTCT GTATATGCAG CATCCCGTGG CCATGAAGTG GTATTGTTTG AAGCCAAGTC AGAAGTGGGT GGTCAGTTCA ATTTAGCGCG TAAAATTCCG GGTAAAGAAG AGTTCAATGA AACTATTCGA TATTTCATTA ACCAAATTAA GTTACATAAC GTTGAACTGC GTCTAAACAC TAAATTGGAT GCGGCAGTGT TAGCTAATGA GAAATTTGAT GAAGTGGTCA TCGCCGCTGG TGTGGTGCCA CGAGCGTTGG AATTACCAGG TTTTGATAAT CCTAAAGTGG TCGATTACCA ACAAGTATTA ACCGGCCAAG TTGAAATAGG TAAAACGGTA GCATTGATTG GTGCTGGCGG TATTGGTTTT GATATGGCTC ATTTCTTATG CGAATTAGAA TCGAGCACTT TGCAACCCGA TAAATGGTTA AAACAGTGGG GCATTGATAA AACCTATCAG AATGCTGGCG GGTTAACTGT AGAAGCCGAA CATGTTCCAG GTCGTGAAGT GTATTTACTG CAACGTAAAA CCACCAAAAT GGGCAAAGGT TTGGGTAAAA CTACTGGCTG GATCCATCGC AGTGTGTTGA AGCAACATCA AGTTCATATG AAAACTGGCG TAAGCTACGA AAAGTTTGAT GAACAAGGTC TGCACATTAA AATCGGTGAA CAATCTGAAA TTCTTGCTGT AGATAACGTG GTGTTGTGTG CTGGACAAAC GTCGAATCGC AGTTTGGTTG ATGAAATGAA AGCCAGCGGA TTACCTGTAC ATTTAATTGG TGGAGTCGAT GTGGCGGCTG AATTAGATGC TAAACGCGCT ATCCGTCAGG GTGCAGAACT TGCGATGAGT ATTTAA
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Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERAQG GVGLIVTGGI APNLRGRLAP HACQLSFSWQ VGKHKIVTDA VHEAGGKICM QILHAGRYSY HPFSLAPSKV KSPITPFTPS AMSARQVRST IKDYATSAAL AKKAGYDGVE VMGSEGYLIN QFISSRTNKR NDEWGGSYEN RVKFPIEIVN AIRQKVGSDF IIVFRLSMLD LVDNGSTWDE VVKLAKSLEQ AGVSIINTGI GWHEARVPTI STSVPRGAFS WVTEKLKKEV KVPLIATNRI NTPEIGESII ASGQADMVSM ARPFLADAEF VNKAAANTPE LINTCIGCNQ ACLDHTFSMK RATCLVNPRA CYETEINFTP TTSKKRIAVM GAGPAGMAFS VYAASRGHEV VLFEAKSEVG GQFNLARKIP GKEEFNETIR YFINQIKLHN VELRLNTKLD AAVLANEKFD EVVIAAGVVP RALELPGFDN PKVVDYQQVL TGQVEIGKTV ALIGAGGIGF DMAHFLCELE SSTLQPDKWL KQWGIDKTYQ NAGGLTVEAE HVPGREVYLL QRKTTKMGKG LGKTTGWIHR SVLKQHQVHM KTGVSYEKFD EQGLHIKIGE QSEILAVDNV VLCAGQTSNR SLVDEMKASG LPVHLIGGVD VAAELDAKRA IRQGAELAMS I
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