| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2125 |
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| Symbol | |
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| ID | 4279037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2526504 |
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| End bp | 2527784 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134914 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_750809 |
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| Protein GI | 114563296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0002495 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC TGCGTCTTAA TCCTATTAAT TGCATCAACG GCGAAATTAA TATTCCAGGG
TCTAAAAGTA TTTCAAACCG TGTATTACTT TTAGCCACGC TTGCCAGAGG CAGCACTACA
CTTACAAACT TGTTAGATTC TGACGACATT CGCTATATGC TGGCATCGCT TAAACAACTG
GGTATTCAAT ACACATTAAG TGAAGACAAA ACCGAATGCG TTGTTGAAGG AAACGAAGGT
CCAATTTCAT CTGCTAGCGT TCAAAGCCTC TTTTTAGGTA ATGCTGGTAC GGCAATGCGT
CCTTTATGCG CAGCATTAAC ATTAGGCCAA GGCGAATTTA CCTTAACGGG TGAGCCACGA
ATGGAAGAGC GACCAATTGG TGATTTAGTT GATGCGCTGC GTCAGCTCGG TGCAGATGTC
ACTTACCTTA AAAACGATGG TTTTCCACCG TTAACGATAA ATGCCACAGG GCTAAACGGC
GGCGATGTTG AAATTGCCGG TGATTTATCA AGCCAGTTTT TGACGGCTTT GCTTATGGTC
GCACCGCTGA CTAAAGACAG CGTTAATATT AAAATTAAAG GTGAGTTAGT TTCAAAACCT
TATATCGATA TTACCATCGC ACTGATGAAA CAATTCGGTG TTGAGGTGAT TAACCACCAA
TATCAACGTT TCGAAATTAA AGCCGGTCAG CACTATGTAT CTCCGGGTAA AGTATTAGTT
GAAGGTGACG CTTCATCTGC ATCGTACTTT TTAGCCGCGG GTGCCATTAA AGGTGGTGAA
GTTAAGGTCA CTGGTGTTGG CCGTTTAAGT ATTCAAGGCG ATGTAAAATT TGCTGATGCA
TTAGCCCAAA TGGGCGCAGA CATAGAGTGG GGCGATGATT ACATTATTGC CAGAAAGTCT
ACGTTAACAG CCATCGAAAT GGACATGAAT CATATTCCCG ATGCTGCAAT GACCATTGCT
ACAGCTGCTT TATTTGCGAC AGGCACCACA AAACTGACTA ACATCTACAA CTGGCGCATT
AAAGAAACAG ACCGCTTAGC CGCAATGGCC ACTGAGTTAC GTAAAGTGGG CGCAATAGTT
GAAGAAGGTC ATGACTATAT TACGATCACA CCACCTGCAG AACTCAATAC TGCAGCAATT
GATACCTATA ATGATCATCG TATGGCAATG TGTTTTTCAA TGATGGCCTT TGCTGATTGT
GGGATCACCA TTAACGATCC AGACTGCACA TCTAAGACCT TTCCAGATTA CTTTGCACAA
TTTACACAAT TGGCAAAATA A
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| Protein sequence | MKQLRLNPIN CINGEINIPG SKSISNRVLL LATLARGSTT LTNLLDSDDI RYMLASLKQL
GIQYTLSEDK TECVVEGNEG PISSASVQSL FLGNAGTAMR PLCAALTLGQ GEFTLTGEPR
MEERPIGDLV DALRQLGADV TYLKNDGFPP LTINATGLNG GDVEIAGDLS SQFLTALLMV
APLTKDSVNI KIKGELVSKP YIDITIALMK QFGVEVINHQ YQRFEIKAGQ HYVSPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRLS IQGDVKFADA LAQMGADIEW GDDYIIARKS
TLTAIEMDMN HIPDAAMTIA TAALFATGTT KLTNIYNWRI KETDRLAAMA TELRKVGAIV
EEGHDYITIT PPAELNTAAI DTYNDHRMAM CFSMMAFADC GITINDPDCT SKTFPDYFAQ
FTQLAK
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