Gene Sfri_2124 details

Gene Information

• Locus tag: Sfri_2124
• Symbol: cmk
• ID: 4279036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2525634
• End bp: 2526323
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638134913
• Product: cytidylate kinase
• Protein accession: YP_750808
• Protein GI: 114563295
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000109139
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAC GATCTCCAGT GATCACAGTA GATGGCCCAA GCGGTGCAGG GAAAGGGACT 
ATATGCCAAT TGTTGGCACA ACATTTAGGG TGGCATTTGT TAGACAGTGG TGCGATTTAT 
CGTGTTTTAG CCTTAGCCGC TATTCATCAT GATGTTGAGC TAGAAAACGA AGAAGCACTG 
ACCTTATTGG CTGCACACCT TGATGTTCAA TTTTTAACGG GCACCGAGGC CGATGCCATT 
AAAGTGATTC TCGAAGGTGA AGATGTTACC ACCACCATTC GCACACAAGA ATGCTCAAAT 
GCTGCCTCAA AAGTGGCGGC ATTACCACGC GTACGTGAGG CATTATTACG TCGTCAACGT 
GCATTTAGCG CCGCTCCAGG ACTTGTTGCC GATGGACGCG ACATGGGCAC AGTGGTTTTT 
TCTAAAGCAC CAGTAAAAAT ATTTTTAACT GCGTCTGCTG AAGAACGTGC GCAAAGACGC 
TATAATCAGT TGCAGGACAA GGGCTTCGAT GTTAAAATCG ATCGCCTTTT AGCTGAAATT 
ATTGAACGAG ACGACCGTGA TACCAATCGC GCCGCTTCGC CACTAGTCCC AGCTGATGAT 
GCACTTGTTA TTGATACAAG CGGCATAGGC ATTGAAGATG TATTGAAGCA AGTGCTTGAA 
TATGTTGGAC AAAAAATTAC TGTTACATAA 

 

Protein sequence

MSERSPVITV DGPSGAGKGT ICQLLAQHLG WHLLDSGAIY RVLALAAIHH DVELENEEAL 
TLLAAHLDVQ FLTGTEADAI KVILEGEDVT TTIRTQECSN AASKVAALPR VREALLRRQR 
AFSAAPGLVA DGRDMGTVVF SKAPVKIFLT ASAEERAQRR YNQLQDKGFD VKIDRLLAEI 
IERDDRDTNR AASPLVPADD ALVIDTSGIG IEDVLKQVLE YVGQKITVT