| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2119 |
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| Symbol | |
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| ID | 4279031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2521139 |
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| End bp | 2521837 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134908 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_750803 |
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| Protein GI | 114563290 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000535005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATA AATCCATTGT AGTCGCCCTC GACTATGACA ATAAAAACGA CGCATTAACC
TTTATTGATA AACTTGATCC AGAGATGTGT CGTTTAAAAA TCGGCAAAGA GATGTTTACG
TTATTCGGAC CTGATCTGGT TAAAGACATT CACAGTCGTG ATTTTGATTT ATTTCTCGAT
TTAAAGTTTC ATGATATTCC CAATACGGTA GCAAAAGCTG TTGCCGCTGC CGCTGATCTA
GGTGTGTGGA TGACTAACGT GCATGCCAGT GGCGGCTTAG CCATGATGCA GGCAGCCAAA
AAAGCATTGA TTCCCTTTGG TGACGATGCA CCATTATTGA TTGCCGTCAC AGTATTAACA
TCGATGTCAG ATGAAGATTT AGTGTTGCTT GGTATTAATG TGCCTGCGTT TGAACATGTG
CTGCGCTTAG CCAAATTGAC TCATCAAGCA GGATTAGACG GGGTTGTGTG TTCGGCTCAA
GAAGCTAAAT TGCTTAAATC ATCATTTGGG CAAGATTTTA CCTTAGTTAC ACCGGGTATT
AGACCCGCAG GAAGTGATGC CGGTGATCAA CATCGTGTCA TGACTCCACC CCAGGCTATT
GCGGCAGGGT CAGATTATTT AGTGATTGGT CGACCAATTA CTCAAGCTGC CGACCCATTA
GCAGCACTTA AAGCTATTTA TCAATCACTG CATGTTTGA
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| Protein sequence | MTDKSIVVAL DYDNKNDALT FIDKLDPEMC RLKIGKEMFT LFGPDLVKDI HSRDFDLFLD
LKFHDIPNTV AKAVAAAADL GVWMTNVHAS GGLAMMQAAK KALIPFGDDA PLLIAVTVLT
SMSDEDLVLL GINVPAFEHV LRLAKLTHQA GLDGVVCSAQ EAKLLKSSFG QDFTLVTPGI
RPAGSDAGDQ HRVMTPPQAI AAGSDYLVIG RPITQAADPL AALKAIYQSL HV
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