Gene Sfri_2106 details

Gene Information

• Locus tag: Sfri_2106
• ID: 4279018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2507325
• End bp: 2507879
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638134895
• Product: hydrogenase maturation protease
• Protein accession: YP_750790
• Protein GI: 114563277
• COG category: [C] Energy production and conversion
• COG ID: [COG0680] Ni,Fe-hydrogenase maturation factor
• TIGRFAM ID: [TIGR00072] hydrogenase maturation protease; [TIGR00140] hydrogenase expression/formation protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAAA TATTGCTGTT AGGTATAGGC AATGTATTGT ACGCCGATGA AGGAGTCGGC 
GTGCATTTTG TCAATTATAT CAAAGAGAAA TACCAATTTA GCCACCAAAC TGACAGCATA 
GATATTGTCG ACGGTGGCAC CTTAGCTCAA GGCCTTATTC CGATGATAAG CCAGTACGAC 
CATTTAATTG TGGTCGATAC GGTGAACAGT GTTGGCGTGG AGCCTGGTGA AGTGTACTTT 
TTCGATTTTG ATCACGCCCC TGCTGAAATC GATTGGCAAG GTAGTGCTCA TGAAGTAGAA 
ATGCTGCAAA CACTCAACAT GATGGACATT GTGGGTGATA GGCCACACAC GTTTGTATTA 
GGTGTTACCC CTACCGTGAT TGAGCCAATG ACTTTGGGGC TTACGCCACA TTTACATGCC 
GCCATTCCGC TAATGGAACA CGCCCTGTTA ACCCATTTAA CCGACTTAGG GTTTAGCCAG 
CAGATTGTGA ATGAAATAAC GGTTGATCAG GTGATTCCTG ACGCTTATAA GCGAGGTTGC 
TATGTCGATG CATAA 

 

Protein sequence

MKKILLLGIG NVLYADEGVG VHFVNYIKEK YQFSHQTDSI DIVDGGTLAQ GLIPMISQYD 
HLIVVDTVNS VGVEPGEVYF FDFDHAPAEI DWQGSAHEVE MLQTLNMMDI VGDRPHTFVL 
GVTPTVIEPM TLGLTPHLHA AIPLMEHALL THLTDLGFSQ QIVNEITVDQ VIPDAYKRGC 
YVDA