| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2022 |
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| Symbol | |
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| ID | 4278934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2394555 |
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| End bp | 2395373 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638134809 |
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| Product | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
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| Protein accession | YP_750706 |
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| Protein GI | 114563193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2992] Uncharacterized FlgJ-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.29202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATAG GCAATGTAGG TCAGGTGACA TTTGCATTAG GTTTAGCCGT TGTTGCTTTG
TTAGCGATGC GACTGTTCAT TTTTCCTAAT ACTAGTCAAG TATCAGTATC ATCTGGTGCG
CGTCAGCTGA ATAATATTGA CCTAGGTAAA GTGCCAATGT TTGCTGAAAT AGAAGATGTT
GCCACTAAAA AACAAACATT TTTTGATTTT TTACGTCCTG CCATTGAAGC ACAAAATCAG
ATAATTATTC ACGATCGTCA ATTTTTACTG GCCGTTATTG AGCAAATTGA TAATGGTTTA
GGGTTAAGTG AACATGATAA TGATAGATTG ACATCTATTA TTGCTAAATA TCAATATGAT
GTTCAAGCAT TTACTCGCAT AACGTTAACG CCATTATTAA AGCGTATCGA TATTATTCCA
GTCGATATGG TATTAGTACA AGCGGCCAAT GAAAGCGGTT GGGGCAGTTC ACGTTTTGCT
GTCGACGGGT TTAACTTTTT TGGCCAGTGG TGTTTTATTG AGGGCTGTGG TTTAGTGCCA
TTAGCAAGAG CTGATGGCAA AATCCATGAA GTTGCAGTAT TCGATTCACC CAAAGATTCC
ATTATTGCTT ACATGATCAA TTTAAACACC AATTCTGCGT ACCGTTTATT TCGTTCTATT
CGAGCCGATT TACGGGCTCA AAAAGTTAAA CCAACAGCCG AGAAATTGGT TTATGGGTTA
ATGAATTATT CAGAACGAAA AGATGAGTAC ATTGATGAAC TCCTCGAAAT GCTTAAACAC
AATAAGCCTT ATTTACAAGG GAACAAAGCT AATGCGTAA
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| Protein sequence | MKIGNVGQVT FALGLAVVAL LAMRLFIFPN TSQVSVSSGA RQLNNIDLGK VPMFAEIEDV
ATKKQTFFDF LRPAIEAQNQ IIIHDRQFLL AVIEQIDNGL GLSEHDNDRL TSIIAKYQYD
VQAFTRITLT PLLKRIDIIP VDMVLVQAAN ESGWGSSRFA VDGFNFFGQW CFIEGCGLVP
LARADGKIHE VAVFDSPKDS IIAYMINLNT NSAYRLFRSI RADLRAQKVK PTAEKLVYGL
MNYSERKDEY IDELLEMLKH NKPYLQGNKA NA
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