| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2013 |
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| Symbol | |
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| ID | 4278925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2385663 |
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| End bp | 2386637 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134800 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_750697 |
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| Protein GI | 114563184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00187341 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATGA GTAACTTCTG GAGCATTTGG ATTTCTGTAC TGACGATTGT GGTCATTGCT
GGTTGTTTTA TCCTTCTAAA ACTGGTTAAT AATAATTACA CCGGTGTTGA AGAAGGTAAA
TCAATGGGCC ACAGTTTTGA TGGTATTGAA GAACTGAACA ACCCACTACC AAAGTGGTGG
GCGTACATGT TCTATTTAAC CATCGTATTC GGTGTGATCT ATTTAGCTCT ATATCCAGGC
CTAGGTAACT ACAAAGGTCT GTTTGGTTGG ACAAGTTCGA ACCAAAGTAT TGGTACTGAA
AAAGGCATTA AAGCCGACTC AGCTGCAGCG CTTGAAGCAG CAAAAGCTGA CAACCGTTTA
TCTCAATATG ACCGCGAAGT GGCCCATGCT GACGAAAAAT ACGGTCCAAT TTTTGCGGCA
TATTTAGCGA CACCGTTAGA AGAGCTAGTA AAAGACCCTG AAGCATTAAA AGTGGGCGGT
CGTTTGTTTT TACAAAACTG TTCACAATGT CATGGTTCTG ATGCTCGTGG CTCTAAGGGC
TTCCCTAACC TTACCGACAG TGATTGGTTA TATGGCGGCG AACTAGCCAC TATTAAAACC
ACTATCATGA ACGGTCGCAA CGGCATGATG CCGCCAAAAG GTGGTTTACC TATCGAAGAC
AGCGAAATTA AAGGTCTTGC TGAATACGTA GTTAAACTTT CTGGTGGTGA ACATGACGAA
GCGTTAGCCG CTCAAGGTCA AGGTTCATTT ATGAAAGGTT GTTTTGCGTG TCATGGTATG
GATGCAAAAG GCAACAAATT CATGGGTTCG CCTAACCTAA CTGATAACGT ATGGTTGTAT
GGCGGTAGCC GTGGTGTGAT TGCAGAATCT ATCACTAATG GCCGCGCAGG CGTTATGCCA
GCATGGAAAG ACATTCTTGG TGAAGAGAAA GTCCATGTCG TAGCAGCTTA TGTTTATAGC
TTATCAAACA AATAG
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| Protein sequence | MIMSNFWSIW ISVLTIVVIA GCFILLKLVN NNYTGVEEGK SMGHSFDGIE ELNNPLPKWW
AYMFYLTIVF GVIYLALYPG LGNYKGLFGW TSSNQSIGTE KGIKADSAAA LEAAKADNRL
SQYDREVAHA DEKYGPIFAA YLATPLEELV KDPEALKVGG RLFLQNCSQC HGSDARGSKG
FPNLTDSDWL YGGELATIKT TIMNGRNGMM PPKGGLPIED SEIKGLAEYV VKLSGGEHDE
ALAAQGQGSF MKGCFACHGM DAKGNKFMGS PNLTDNVWLY GGSRGVIAES ITNGRAGVMP
AWKDILGEEK VHVVAAYVYS LSNK
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