| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1990 |
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| Symbol | |
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| ID | 4278902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2358532 |
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| End bp | 2359257 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134777 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_750674 |
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| Protein GI | 114563161 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.697946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACATC CTGGTTTAAC AAATACAGTA CTCGTCGTTG ACGATGAAGC GGTGATCCGA
GCTCGATTAA AAGGTTATTT TGAGCGTGAA GGTTATCGGG TGCTTGAAGC TGGAGACGGC
GAACAGATGT GGCAACAGTT TACAAATCAA CATATCGATT TGGTGATGTT AGATATTAAC
TTACCCGGTA CCGATGGTTT GAGCTTGGCA CGTGAACTGA GAAGCCGTTC GGATGTGGGC
ATTATTTTAG TCACAGGTCG TGATGAAACC ATTGATAAAA TCGTTGGTCT TGAAATGGGC
GCTGATGATT ATGTGACTAA ACCATTTGAA TTAAGAGAAC TATTAGTAAG AGTTAAAAAT
TTGTTGTGGC GAATTTCATT AGTTAAAAAA GCACAGCAAG ACGTTGTAGA ACAATTTGAA
CAGTGTGACG ATATCATTGC GTTCGATAAA TATATTCTTG AGTTAAACAG CCGAAAACTG
AGTCGTGGTG ACGAGGTAAT AAAGCTGACT AAAGCAGAGT TCGAATTACT TACCGCCTTT
GCATTGCATC CGCAGCAAGT ACTATCTCGT GAGCGACTAA TGCAGCAAAC AAGCCACCGT
AATGAAGATG TAAATGATAG AACCATTGAT GTCATTATTC GTCGATTACG AAACAAGCTA
CAGGCTGACC TGTTTGTAAC GGTTCATGGA GAAGGCTATT TGTTTGCGAC AAAGATTAAA
GATTAG
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| Protein sequence | MAHPGLTNTV LVVDDEAVIR ARLKGYFERE GYRVLEAGDG EQMWQQFTNQ HIDLVMLDIN
LPGTDGLSLA RELRSRSDVG IILVTGRDET IDKIVGLEMG ADDYVTKPFE LRELLVRVKN
LLWRISLVKK AQQDVVEQFE QCDDIIAFDK YILELNSRKL SRGDEVIKLT KAEFELLTAF
ALHPQQVLSR ERLMQQTSHR NEDVNDRTID VIIRRLRNKL QADLFVTVHG EGYLFATKIK
D
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