| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1962 |
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| Symbol | |
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| ID | 4278874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2331606 |
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| End bp | 2332718 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134749 |
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| Product | hypothetical protein |
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| Protein accession | YP_750646 |
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| Protein GI | 114563133 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCG CAACATTCCA TATCGACATG CACGATGATA ACTGCTTACT GAACCTTGCT
GGTGATTGGC AATTAGGCCA AGCACCGCTA GGCGCAGATA TTTGTGCTGA GCTGCCATCC
AATTGCCAAT CTATCACCTT AATCACCACA GAATTATCCC ACTGGGATTC AAGCCTCGCC
ATTGCCTTAT TACAATTATC TCGCTGGTGT GAACAGCAAA AAATATCACT AGACACTCAA
CAAACACCTC AAGGATTGCA GCAATTACTG CAACTGGCTA CCGATGTTCC TGTTTATCAA
CCCACTAATG ATGGCGCTAT TGGCGGATTG TGGCCGACCT TACGCCGAAG TCTTATTAAG
CAAGGCTTAC AGGTGCACGA TGGATTAGTA TTCGTTGGCG ACTGTACCTT GGTATTAGGC
CGTTGGTTGG GAGGTAAAGC GAGGACTCGT AGAAGTGATA TTATTTTTTT TATCGAACAG
GCGGGGCCTA AAGGACTTGC GATTGTCACC TTAATTAGCC TGCTCGTGGG AATGATTTTG
GCTTATTTAG GTTCGGTACA GCTGCGTCAA TTAGGCGCCC AGGTATATGT GGCTAATTTA
GTGGCTATCG GAATGGTGCG TGAAATGGGC GCTCTAATGA CAGGCGTTAT TATGGCCGGC
CGAACCGGAG CTGCTTATGC GGCGCAGTTA GGCACCATGC AGGTTAATGA AGAAATTGAT
GCGCTGCGAG TAATGGGCAT TCCTACCATG GAGTTTCTGG TTTTACCGCG ATTATTAGCA
TTAATTTTCA TTATGCCACT AATGTGTATT TATTCAGATG TAATAGGCAT GCTTGGCGGT
GCGTTAGTTG CTAACGGGAT GGGCGTAAGT TATACCCAGT ATATTTTGCA AACCCAGGTT
GCGATTGATT GGGTAGATAT TTCTACCGGT TTAATCAAGA GTTTAATTTT TGGGTTTTTA
ATTGCGATTG CGGGTTGCCA GGCGGGACTG CTTTGCGGAC GTGACTCTAA TGCCGTTGGC
TTAGCGACAA CCCACGCTGT GGTTAAGGCC ATCGTGTTTT TGGTTGTCGC CGATGCGGCG
CTTAATATCT TGTACGATAA ATTAGGGATC TAG
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| Protein sequence | MTLATFHIDM HDDNCLLNLA GDWQLGQAPL GADICAELPS NCQSITLITT ELSHWDSSLA
IALLQLSRWC EQQKISLDTQ QTPQGLQQLL QLATDVPVYQ PTNDGAIGGL WPTLRRSLIK
QGLQVHDGLV FVGDCTLVLG RWLGGKARTR RSDIIFFIEQ AGPKGLAIVT LISLLVGMIL
AYLGSVQLRQ LGAQVYVANL VAIGMVREMG ALMTGVIMAG RTGAAYAAQL GTMQVNEEID
ALRVMGIPTM EFLVLPRLLA LIFIMPLMCI YSDVIGMLGG ALVANGMGVS YTQYILQTQV
AIDWVDISTG LIKSLIFGFL IAIAGCQAGL LCGRDSNAVG LATTHAVVKA IVFLVVADAA
LNILYDKLGI
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