Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1959 |
Symbol | |
ID | 4278871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2329255 |
End bp | 2329854 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134746 |
Product | hypothetical protein |
Protein accession | YP_750643 |
Protein GI | 114563130 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000996139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT ATGAAGTTTG GAGCATTAAC TGGGGGATCG GTTTACTGCT ATTGAGTTTA GTGAGTGGCT GCCAAAGCTC TCCCGAAAAA CAATACTTTG TGTTAACTAC AATGCCCAGC CAAATGGTAT CTGGCAGTAT TGCATTAGAG CATGACATTG GTATCGGGCC AATTGACGTA GCCGAATACC TACATTTTAC GCAACTGATG TATCAACTGG ACGATGGTAG CCTGCAACGA TTTGCCAATA GTTATTGGGC TGAACCGCTT GAGCAAGGTA TCAGCCGAGT CATGAGTATC AATCTAAGCC AAGGAGATCG CCGTCGTAAT CTGGTGTTAT TTCCTTGGCG AGCAAACAAC ACTCCCCAGT ACAGCATTAA AATCAAGGTT ACTTCCCTCA ACCGAGATGG CAATAACGCC AGACTCAATG CCAACTGGGA GCTAACAAAC AATTCATTAC ACCAAACGTT GGCAAAACAA AATTTCATCG CGGTCACTAA CGCTGGTTCG ACGGCTGCGG AGTTGGTCAG CGCGTACAGC AACTTATTGA CTCAGTTGGC TAAGGAAATT GAAAAATCAT TACCACAAAA TTCAGATTAA
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Protein sequence | MEKYEVWSIN WGIGLLLLSL VSGCQSSPEK QYFVLTTMPS QMVSGSIALE HDIGIGPIDV AEYLHFTQLM YQLDDGSLQR FANSYWAEPL EQGISRVMSI NLSQGDRRRN LVLFPWRANN TPQYSIKIKV TSLNRDGNNA RLNANWELTN NSLHQTLAKQ NFIAVTNAGS TAAELVSAYS NLLTQLAKEI EKSLPQNSD
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