Gene Sfri_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1959 
Symbol 
ID4278871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2329255 
End bp2329854 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content44% 
IMG OID638134746 
Producthypothetical protein 
Protein accessionYP_750643 
Protein GI114563130 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000996139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT ATGAAGTTTG GAGCATTAAC TGGGGGATCG GTTTACTGCT ATTGAGTTTA 
GTGAGTGGCT GCCAAAGCTC TCCCGAAAAA CAATACTTTG TGTTAACTAC AATGCCCAGC
CAAATGGTAT CTGGCAGTAT TGCATTAGAG CATGACATTG GTATCGGGCC AATTGACGTA
GCCGAATACC TACATTTTAC GCAACTGATG TATCAACTGG ACGATGGTAG CCTGCAACGA
TTTGCCAATA GTTATTGGGC TGAACCGCTT GAGCAAGGTA TCAGCCGAGT CATGAGTATC
AATCTAAGCC AAGGAGATCG CCGTCGTAAT CTGGTGTTAT TTCCTTGGCG AGCAAACAAC
ACTCCCCAGT ACAGCATTAA AATCAAGGTT ACTTCCCTCA ACCGAGATGG CAATAACGCC
AGACTCAATG CCAACTGGGA GCTAACAAAC AATTCATTAC ACCAAACGTT GGCAAAACAA
AATTTCATCG CGGTCACTAA CGCTGGTTCG ACGGCTGCGG AGTTGGTCAG CGCGTACAGC
AACTTATTGA CTCAGTTGGC TAAGGAAATT GAAAAATCAT TACCACAAAA TTCAGATTAA
 
Protein sequence
MEKYEVWSIN WGIGLLLLSL VSGCQSSPEK QYFVLTTMPS QMVSGSIALE HDIGIGPIDV 
AEYLHFTQLM YQLDDGSLQR FANSYWAEPL EQGISRVMSI NLSQGDRRRN LVLFPWRANN
TPQYSIKIKV TSLNRDGNNA RLNANWELTN NSLHQTLAKQ NFIAVTNAGS TAAELVSAYS
NLLTQLAKEI EKSLPQNSD