Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1958 |
Symbol | |
ID | 4278870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2326702 |
End bp | 2328771 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134745 |
Product | endothelin-converting protein 1 |
Protein accession | YP_750642 |
Protein GI | 114563129 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000435105 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT CCTTAATTGC GATTGGATTA ACCACAGCAC TATTAAGTGG TTGCGGCGTA TCTGATACAA ATAACACTAA ACTTGCAACC GTGACCTCAC CAGCCCCCGC TAAAGCAGAG TTAGGTACTT TTGGGGTGGA TTTAGCTGCA CGTAATGAAG CCGTTAAGCC TGGTGATGAC TTTTTTATGT ATTCAAGTGG CACTTGGTAC GACAACTTTG TCATGCCTGC CGACAAAACT CGTTATGGCG CATTTAATGC TTTAGCTGAG CGCAGTGAGA ATCAAGTGAA AGCCATTATC GACGATATTG CCAGCCGCAG CGACTTAACT GCCGAAGAAC AATTAATTGC TGATTTTTAT CATGCCTATA TGGATACCGA CACCATTAAT AAGTTGGGTA TCACGCCAAT TAAAGGCACC TTAGATCAAA TTGCTGCGAT TAGCTCAACA CAAGATTTAA CCAAAGTATT CGGTGAAGCA TGGCTTACTG GTGCATCATC ACCTATTTGG GGTGGTATGT GGTTTAATCG CCTAGATCCA GATCAATATG AAATGACTAT TGGTGCTGGT GGTTTAGGTC TGCCCGATCG CTCGTATTAC CTCGAAGACA GCGAGCGTTT CGTTAACATC CGTAAAGCGT ATGTCGACCA TATCGCTAAA ATGCTCGCCT TTGCTGGTAT AAACGACGGT GCAAAACGTG CCCAAACTAT TTTGGCACTC GAAACAAAAA TTGCACAGGC ACAATGGCCT AGAGAAAAGC GTCGTGACCG TGATTTAACC TTAAACCAAC TCAAACGTGA AGAATTGGTT AAGCAATATC CTGGATTTGA TTGGGATATC TATTTTGCAC AAACCGGTTA CCAAGTGCCG AAACTAAATA TTTCGCAGCC AGAACCCGTT AAAGCAATGA TTGACTTAAT TAACCAACAA CCACTCACTG TGTGGCAAGA CTATTTAACC TTCCACACCA TTAGTAATAA TGCAGGGTTA TTGTCAGAAG ACATTTTCAA TACCAATTTT GCTTTTTTTG GCAAAGAACT CACTGGGCAA GAGCAACCTC GTCCACGCTG GAAACGTGCA GTTGAAGAGA TGTCAGGCAC TCAATCTCTA GGTTTCGCTA TTGGTAAAGT GTATGTGTCG CGTTATTTCC CTGAGTCGTC TAAGCAAAAG ATGGCAGAGT TAGTTAACAA TCTGCGCACA GCATTAGGTC AACGCATTGA TGGTTTAGAT TGGATGGGCG CAGAAACCAA GGTGAATGCT CATGCTAAGT TAGCAGCATT TAATCCAAAA ATTGGTTATC CCGATGTATG GCAACAATTT GATGGCTTAA CCCTCACTAA AAATGATTTA GTGGGTGATA TTAAGAATCT ACGCAAATAC TTCCAAGCCG ATAGCGTAAC AAAAGAACTG GAAAAAACGG ACCGTAATCG TTGGGGGATG ACACCGCAAA CGGTCAATGC CTATTACAAC AGCTCGTTTA ATGAAATTGT GTTCCCTGCG GCAATTTTAC AACCGCCGTT TTTTGATCCA AACGCAGATG CTGCGGTTAA CTATGGCAGT ATCGGTGCCG TAATTGGTCA CGAAATGGGT CATGGTTTTG ATGATCAAGG TTCTAAATCA GACGCCAATG GCGTTCAGCG TAACTGGTGG ACAGATGAAG ATCGTGCCGC TTTTGATGCT AAAGCCGATA AACTCGCTGC GCAATACAAC CAATATGAAC CAATCCCTGA AAACTTTGTT AACGGACGCA ACAGTCTCGG TGAAAACATT GGCGATGTAG GCGGTTTGTC AATGGCATAC CATGCTTACA AATTAAGCTT GAATGGTAAA GAAGCCCCGG TGATAGATGG CGTTACTGGC GATCAACGTT TCTTTTTAGC TTGGGCTCAA GTGTGGAAAG AAAAACGTAC CGAGCAAAGT ATGTTAACTC AGTTACGTGC CGGCACTCAT GCACCAGGTC GTTACCGTGC CCTCGCCCCG CGTAACCACG ATGCTTGGTA TAAAGCCTTT GATGTTAAAC CAGGTGATAA GTTGTACTTG CCAGAAGATC AGCGCGTACG TATTTGGTAA
|
Protein sequence | MNKSLIAIGL TTALLSGCGV SDTNNTKLAT VTSPAPAKAE LGTFGVDLAA RNEAVKPGDD FFMYSSGTWY DNFVMPADKT RYGAFNALAE RSENQVKAII DDIASRSDLT AEEQLIADFY HAYMDTDTIN KLGITPIKGT LDQIAAISST QDLTKVFGEA WLTGASSPIW GGMWFNRLDP DQYEMTIGAG GLGLPDRSYY LEDSERFVNI RKAYVDHIAK MLAFAGINDG AKRAQTILAL ETKIAQAQWP REKRRDRDLT LNQLKREELV KQYPGFDWDI YFAQTGYQVP KLNISQPEPV KAMIDLINQQ PLTVWQDYLT FHTISNNAGL LSEDIFNTNF AFFGKELTGQ EQPRPRWKRA VEEMSGTQSL GFAIGKVYVS RYFPESSKQK MAELVNNLRT ALGQRIDGLD WMGAETKVNA HAKLAAFNPK IGYPDVWQQF DGLTLTKNDL VGDIKNLRKY FQADSVTKEL EKTDRNRWGM TPQTVNAYYN SSFNEIVFPA AILQPPFFDP NADAAVNYGS IGAVIGHEMG HGFDDQGSKS DANGVQRNWW TDEDRAAFDA KADKLAAQYN QYEPIPENFV NGRNSLGENI GDVGGLSMAY HAYKLSLNGK EAPVIDGVTG DQRFFLAWAQ VWKEKRTEQS MLTQLRAGTH APGRYRALAP RNHDAWYKAF DVKPGDKLYL PEDQRVRIW
|
| |