Gene Sfri_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1958 
Symbol 
ID4278870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2326702 
End bp2328771 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content44% 
IMG OID638134745 
Productendothelin-converting protein 1 
Protein accessionYP_750642 
Protein GI114563129 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000435105 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT CCTTAATTGC GATTGGATTA ACCACAGCAC TATTAAGTGG TTGCGGCGTA 
TCTGATACAA ATAACACTAA ACTTGCAACC GTGACCTCAC CAGCCCCCGC TAAAGCAGAG
TTAGGTACTT TTGGGGTGGA TTTAGCTGCA CGTAATGAAG CCGTTAAGCC TGGTGATGAC
TTTTTTATGT ATTCAAGTGG CACTTGGTAC GACAACTTTG TCATGCCTGC CGACAAAACT
CGTTATGGCG CATTTAATGC TTTAGCTGAG CGCAGTGAGA ATCAAGTGAA AGCCATTATC
GACGATATTG CCAGCCGCAG CGACTTAACT GCCGAAGAAC AATTAATTGC TGATTTTTAT
CATGCCTATA TGGATACCGA CACCATTAAT AAGTTGGGTA TCACGCCAAT TAAAGGCACC
TTAGATCAAA TTGCTGCGAT TAGCTCAACA CAAGATTTAA CCAAAGTATT CGGTGAAGCA
TGGCTTACTG GTGCATCATC ACCTATTTGG GGTGGTATGT GGTTTAATCG CCTAGATCCA
GATCAATATG AAATGACTAT TGGTGCTGGT GGTTTAGGTC TGCCCGATCG CTCGTATTAC
CTCGAAGACA GCGAGCGTTT CGTTAACATC CGTAAAGCGT ATGTCGACCA TATCGCTAAA
ATGCTCGCCT TTGCTGGTAT AAACGACGGT GCAAAACGTG CCCAAACTAT TTTGGCACTC
GAAACAAAAA TTGCACAGGC ACAATGGCCT AGAGAAAAGC GTCGTGACCG TGATTTAACC
TTAAACCAAC TCAAACGTGA AGAATTGGTT AAGCAATATC CTGGATTTGA TTGGGATATC
TATTTTGCAC AAACCGGTTA CCAAGTGCCG AAACTAAATA TTTCGCAGCC AGAACCCGTT
AAAGCAATGA TTGACTTAAT TAACCAACAA CCACTCACTG TGTGGCAAGA CTATTTAACC
TTCCACACCA TTAGTAATAA TGCAGGGTTA TTGTCAGAAG ACATTTTCAA TACCAATTTT
GCTTTTTTTG GCAAAGAACT CACTGGGCAA GAGCAACCTC GTCCACGCTG GAAACGTGCA
GTTGAAGAGA TGTCAGGCAC TCAATCTCTA GGTTTCGCTA TTGGTAAAGT GTATGTGTCG
CGTTATTTCC CTGAGTCGTC TAAGCAAAAG ATGGCAGAGT TAGTTAACAA TCTGCGCACA
GCATTAGGTC AACGCATTGA TGGTTTAGAT TGGATGGGCG CAGAAACCAA GGTGAATGCT
CATGCTAAGT TAGCAGCATT TAATCCAAAA ATTGGTTATC CCGATGTATG GCAACAATTT
GATGGCTTAA CCCTCACTAA AAATGATTTA GTGGGTGATA TTAAGAATCT ACGCAAATAC
TTCCAAGCCG ATAGCGTAAC AAAAGAACTG GAAAAAACGG ACCGTAATCG TTGGGGGATG
ACACCGCAAA CGGTCAATGC CTATTACAAC AGCTCGTTTA ATGAAATTGT GTTCCCTGCG
GCAATTTTAC AACCGCCGTT TTTTGATCCA AACGCAGATG CTGCGGTTAA CTATGGCAGT
ATCGGTGCCG TAATTGGTCA CGAAATGGGT CATGGTTTTG ATGATCAAGG TTCTAAATCA
GACGCCAATG GCGTTCAGCG TAACTGGTGG ACAGATGAAG ATCGTGCCGC TTTTGATGCT
AAAGCCGATA AACTCGCTGC GCAATACAAC CAATATGAAC CAATCCCTGA AAACTTTGTT
AACGGACGCA ACAGTCTCGG TGAAAACATT GGCGATGTAG GCGGTTTGTC AATGGCATAC
CATGCTTACA AATTAAGCTT GAATGGTAAA GAAGCCCCGG TGATAGATGG CGTTACTGGC
GATCAACGTT TCTTTTTAGC TTGGGCTCAA GTGTGGAAAG AAAAACGTAC CGAGCAAAGT
ATGTTAACTC AGTTACGTGC CGGCACTCAT GCACCAGGTC GTTACCGTGC CCTCGCCCCG
CGTAACCACG ATGCTTGGTA TAAAGCCTTT GATGTTAAAC CAGGTGATAA GTTGTACTTG
CCAGAAGATC AGCGCGTACG TATTTGGTAA
 
Protein sequence
MNKSLIAIGL TTALLSGCGV SDTNNTKLAT VTSPAPAKAE LGTFGVDLAA RNEAVKPGDD 
FFMYSSGTWY DNFVMPADKT RYGAFNALAE RSENQVKAII DDIASRSDLT AEEQLIADFY
HAYMDTDTIN KLGITPIKGT LDQIAAISST QDLTKVFGEA WLTGASSPIW GGMWFNRLDP
DQYEMTIGAG GLGLPDRSYY LEDSERFVNI RKAYVDHIAK MLAFAGINDG AKRAQTILAL
ETKIAQAQWP REKRRDRDLT LNQLKREELV KQYPGFDWDI YFAQTGYQVP KLNISQPEPV
KAMIDLINQQ PLTVWQDYLT FHTISNNAGL LSEDIFNTNF AFFGKELTGQ EQPRPRWKRA
VEEMSGTQSL GFAIGKVYVS RYFPESSKQK MAELVNNLRT ALGQRIDGLD WMGAETKVNA
HAKLAAFNPK IGYPDVWQQF DGLTLTKNDL VGDIKNLRKY FQADSVTKEL EKTDRNRWGM
TPQTVNAYYN SSFNEIVFPA AILQPPFFDP NADAAVNYGS IGAVIGHEMG HGFDDQGSKS
DANGVQRNWW TDEDRAAFDA KADKLAAQYN QYEPIPENFV NGRNSLGENI GDVGGLSMAY
HAYKLSLNGK EAPVIDGVTG DQRFFLAWAQ VWKEKRTEQS MLTQLRAGTH APGRYRALAP
RNHDAWYKAF DVKPGDKLYL PEDQRVRIW